RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PLAC8L1A1L4L8 177 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 CXorf65A6NEN9 183 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 ELOBQ15370 118 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 MDFIQ99750 246 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 SSBP3Q9BWW4 388 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 OR51M1Q9H341 326 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 IAPPP10997 89 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 LINC00479Q96M42 142 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 OVOL2Q9BRP0 275 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 OR4C46A6NHA9 309 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 HSPE1P61604 102 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 C20orf173Q96LM9 149 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 PAXXQ9BUH6 204 aa4.26□□□□□ -1.73
TOPBP1-201ENST00000260810 IGLV11-55A0A075B6I3 123 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 H3BQ15 152 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 HLA-DQA1P01909 254 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 FAM3BP58499 235 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 TM4SF20Q53R12 229 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 DUX5Q96PT3 197 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 RARRES2Q99969 163 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 LOC102723971A0A1B0GUV8 181 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 SRIP30626 198 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 GNG10P50151 68 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 VMO1Q7Z5L0 202 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 FAM103A1Q9BTL3 118 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 BEX4Q9NWD9 120 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 DPM3Q9P2X0 92 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 A0A1B0GUS0 222 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 A0A1W2PPQ1 181 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 IZUMO1RA6ND01 250 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 MARCH11A6NNE9 402 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 PSMB8P28062 276 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 TEX45Q8NA69 505 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 PRELID3AQ96N28 172 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 VAMP8Q9BV40 100 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 METTL1Q9UBP6 276 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 GCGP01275 180 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 CTSGP08311 255 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 PRR31Q5SQ13 230 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 TOMM20LQ6UXN7 152 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 FMC1Q96HJ9 113 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 RCC1LQ96I51 464 aaKnown RBP4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 SGK494Q96LW2 274 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 RSG1Q9BU20 258 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 C20orf24Q9BUV8 137 aa4.25□□□□□ -1.73
TOPBP1-201ENST00000260810 LINC00862A6NCI5 91 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 A6NDX4 124 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 OR2B11Q5JQS5 317 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 TMEM252Q8N6L7 170 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 BEND2Q8NDZ0 799 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 NUDT11Q96G61 164 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 YAE1D1Q9NRH1 226 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 OVOL1O14753 267 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 NPFFO15130 113 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 MOSP00540 346 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 SAA4P35542 130 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 IER3P46695 156 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 CDX1P47902 265 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 LCN15Q6UWW0 184 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 PACRGQ96M98 296 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 ZNF257Q9Y2Q1 563 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 RBFOX3A6NFN3 312 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 AGPAT2O15120 278 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 UNQ5815/PRO19632Q6UWF5 114 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 GTSCR1Q86UQ5 136 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 RMI2Q96E14 147 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 USMG5Q96IX5 58 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 MAP1LC3AQ9H492 121 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 FAM223BA6NKX1 122 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 HSPB1P04792 205 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 CD1BP29016 333 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 LCN2P80188 198 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 ZNF124Q15973 351 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 FAM223AQ8IWN6 122 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 OR5C1Q8NGR4 320 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 FAM210BQ96KR6 192 aa4.24□□□□□ -1.73
TOPBP1-201ENST00000260810 GGTLC3B5MD39 225 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 FNDC10F2Z333 226 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 TIMM23O14925 209 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 SMAD7O15105 426 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 ZNF207O43670 478 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 IGHV4-59P01825 116 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 EFNA4P52798 201 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 FHL3Q13643 280 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 MLST8Q9BVC4 326 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 PGPEP1LA6NFU8 196 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 ZNF688P0C7X2 276 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 KIR2DL4Q99706 377 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 TMEM133Q9H2Q1 129 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms