RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KIR2DL5BA0A0G2JPC4 375 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 RBMY1BA6NDE4 496 aaKnown RBP10.4□□□□□ -0.74
VPS25-201ENST00000253794 RBMY1EA6NEQ0 496 aaKnown RBP10.4□□□□□ -0.74
VPS25-201ENST00000253794 H3BMM0 161 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 HBE1P02100 147 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 RBMY1DP0C7P1 496 aaKnown RBP10.4□□□□□ -0.74
VPS25-201ENST00000253794 PPT1P50897 306 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 RANP62826 216 aaKnown RBP10.4□□□□□ -0.74
VPS25-201ENST00000253794 ICAM4Q14773 271 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 KIR2DL5AQ8N109 375 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 ZNF680Q8NEM1 530 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 KIR2DL5BQ8NHK3 375 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 MRAPQ8TCY5 172 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 NKX6-2Q9C056 277 aaPredicted RBP10.4□□□□□ -0.74
VPS25-201ENST00000253794 TUBA4BQ9H853 241 aa10.4□□□□□ -0.74
VPS25-201ENST00000253794 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
VPS25-201ENST00000253794 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 M0R3E3 92 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 DUSP14O95147 198 aaKnown RBP10.39□□□□□ -0.75
VPS25-201ENST00000253794 FRMD6-AS1P0C7T7 363 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 BLOC1S1P78537 153 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 EBLN2Q6P2I7 272 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 STHQ8IWL8 128 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 OR8A1Q8NGG7 326 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 RXFP4Q8TDU9 374 aa10.39□□□□□ -0.75
VPS25-201ENST00000253794 LOC102724200A0A096LPH7 203 aaPredicted RBP10.38□□□□□ -0.75
VPS25-201ENST00000253794 FAM74A7A6NL05 159 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 ZNF705FA8MVS1 300 aaPredicted RBP10.38□□□□□ -0.75
VPS25-201ENST00000253794 GGTLC3B5MD39 225 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 PRAC2D3DTV9 90 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 F6UB75 175 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 IFNA7P01567 189 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
VPS25-201ENST00000253794 DEFB1P60022 68 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
VPS25-201ENST00000253794 YTHDF2Q9Y5A9 579 aaKnown RBP10.38□□□□□ -0.75
VPS25-201ENST00000253794 DNAH9Q9NYC9 4486 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 RBAKDNA6NC62 111 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 PGPA6NDG6 321 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 NPIPB6E9PJ23 425 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 CNN1P51911 297 aaKnown RBP10.37□□□□□ -0.75
VPS25-201ENST00000253794 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
VPS25-201ENST00000253794 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 CCDC28AQ8IWP9 274 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 IQCF2Q8IXL9 164 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 ODF3Q96PU9 254 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
VPS25-201ENST00000253794 SERTM2A0A1B0GWG4 89 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 UBE2CO00762 179 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 CSN1S1P47710 185 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 APOC4P55056 127 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 CCL20P78556 96 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 PPP1R14DQ9NXH3 145 aa10.36□□□□□ -0.75
VPS25-201ENST00000253794 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
VPS25-201ENST00000253794 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
VPS25-201ENST00000253794 HIST1H1AQ02539 215 aaPredicted RBP10.35□□□□□ -0.75
VPS25-201ENST00000253794 HAGHQ16775 308 aa10.35□□□□□ -0.75
VPS25-201ENST00000253794 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
VPS25-201ENST00000253794 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
VPS25-201ENST00000253794 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
VPS25-201ENST00000253794 TXNDC17Q9BRA2 123 aa10.35□□□□□ -0.75
VPS25-201ENST00000253794 CSTL1Q9H114 145 aa10.35□□□□□ -0.75
VPS25-201ENST00000253794 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 PAGE4O60829 102 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 TCRAP04437 139 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
VPS25-201ENST00000253794 TAGLN2P37802 199 aaKnown RBP10.34□□□□□ -0.75
VPS25-201ENST00000253794 UBE2G2P60604 165 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 NUTF2P61970 127 aaKnown RBP10.34□□□□□ -0.75
VPS25-201ENST00000253794 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 EPDR1Q9UM22 224 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 AGRNO00468 2067 aa10.34□□□□□ -0.75
VPS25-201ENST00000253794 A0A1B0GV50 99 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
VPS25-201ENST00000253794 AMBPP02760 352 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 NMBP08949 121 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
VPS25-201ENST00000253794 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
VPS25-201ENST00000253794 IFITM2Q01629 132 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 Q6ZWC4 215 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 ZNF767PQ75MW2 155 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 OR4B1Q8NGF8 309 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 HIST1H2BAQ96A08 127 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 TM2D3Q9BRN9 247 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 ATG101Q9BSB4 218 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
VPS25-201ENST00000253794 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
VPS25-201ENST00000253794 IFNA1P01562 189 aa10.32□□□□□ -0.76
VPS25-201ENST00000253794 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms