RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CFHR4Q92496 578 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 HIF1ANQ9NWT6 349 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 PEF1Q9UBV8 284 aaKnown RBP7.97□□□□□ -1.13
COPB1-201ENST00000249923 HSPB8Q9UJY1 196 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 B9A039 149 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 K7EP13 123 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 TGFAP01135 160 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 NBL1P41271 181 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 KLRD1Q13241 179 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 BVES-AS1Q5T3Y7 98 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 TNFRSF14Q92956 283 aa7.97□□□□□ -1.13
COPB1-201ENST00000249923 TRAV30A0A087WSZ9 112 aa7.96□□□□□ -1.13
COPB1-201ENST00000249923 F8W735 103 aaPredicted RBP7.96□□□□□ -1.13
COPB1-201ENST00000249923 MRPS16Q9Y3D3 137 aaKnown RBP7.96□□□□□ -1.13
COPB1-201ENST00000249923 SPCS1Q9Y6A9 102 aa7.96□□□□□ -1.13
COPB1-201ENST00000249923 CHD8Q9HCK8 2581 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 IGHV2-70DA0A0C4DH43 119 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 ORM1P02763 201 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 ARMS2P0C7Q2 107 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 CRIP1P50238 77 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 RBPJQ06330 500 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 ZNF672Q499Z4 452 aaPredicted RBP7.96□□□□□ -1.14
COPB1-201ENST00000249923 LY6G5BQ8NDX9 201 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 STXBP6Q8NFX7 210 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 FMC1Q96HJ9 113 aa7.96□□□□□ -1.14
COPB1-201ENST00000249923 IGHV3-49A0A0A0MS15 119 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 LIPFP07098 398 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 DYNAPQ8N1N2 210 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 HIGD1AQ9Y241 93 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 SPTBN4Q9H254 2564 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 TAX1BP3O14907 124 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 EVI2AP22794 236 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 IFI27P40305 119 aaPredicted RBP7.95□□□□□ -1.14
COPB1-201ENST00000249923 NDPQ00604 133 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 OR10AG1Q8NH19 301 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 SMIM12Q96EX1 92 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 ZNF414Q96IQ9 312 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 ZNF492Q9P255 531 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 SETD2Q9BYW2 2564 aaPredicted RBP7.95□□□□□ -1.14
COPB1-201ENST00000249923 FAM90A27PA6NNH2 459 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 K7ENP7 123 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 CD3EP07766 207 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 FCGR2BP31994 310 aaPredicted RBP7.95□□□□□ -1.14
COPB1-201ENST00000249923 CDKN1BP46527 198 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 TWIST1Q15672 202 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 SIGLEC15Q6ZMC9 328 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 VKORC1Q9BQB6 163 aa7.95□□□□□ -1.14
COPB1-201ENST00000249923 IGKV3-7A0A075B6H7 116 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 FAM106CPP0CH98 169 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 FAM106AQ4KMX7 169 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 ZNF491Q8N8L2 437 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 RPEQ96AT9 228 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 UFC1Q9Y3C8 167 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 TRBV19A0A075B6N1 114 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 A6NDN8 102 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 K7ERJ3 54 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 CKS2P33552 79 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 FOXE3Q13461 319 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 CT83Q5H943 113 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 SCNM1Q9BWG6 230 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 NHP2Q9NX24 153 aaKnown RBP7.94□□□□□ -1.14
COPB1-201ENST00000249923 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 FOXC1Q12948 553 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 MRPL52Q86TS9 123 aaKnown RBP7.94□□□□□ -1.14
COPB1-201ENST00000249923 ZNF575Q86XF7 245 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 OR2K2Q8NGT1 345 aa7.94□□□□□ -1.14
COPB1-201ENST00000249923 TMEM213A2RRL7 107 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 H3BRN7 92 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 RBPMS2Q6ZRY4 209 aaKnown RBP7.93□□□□□ -1.14
COPB1-201ENST00000249923 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 OR4F17Q8NGA8 305 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 FANCD2OSQ96PS1 177 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 RASL11BQ9BPW5 248 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 SHANK2-AS3Q9BTD1 123 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 OTORQ9NRC9 128 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 TMEM160Q9NX00 188 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 CSPG4Q6UVK1 2322 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 A1L4Q6 167 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 D6R8Y8 96 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 KIR3DS1Q14943 382 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 A0A1B0GUT8 65 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 A0A1W2PPR1 153 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 Q8TAT8 98 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 NGBQ9NPG2 151 aa7.93□□□□□ -1.14
COPB1-201ENST00000249923 NCOR2Q9Y618 2525 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 A0A0G2JLM5 398 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 ODF3BA8MYP8 253 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 K7EQM0 130 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 FABP2P12104 132 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 PCP2Q8IVA1 136 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 PSMG3-AS1Q96PY0 264 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 RABAC1Q9UI14 185 aa7.92□□□□□ -1.14
COPB1-201ENST00000249923 UTP20O75691 2785 aaKnown RBP7.92□□□□□ -1.14
COPB1-201ENST00000249923 NCBP2LA6PVI3 153 aaKnown RBP7.92□□□□□ -1.14
COPB1-201ENST00000249923 CRXO43186 299 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms