RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PRB4P10163 310 aaPredicted RBP10.3□□□□□ -0.76
VAMP4-201ENST00000236192 NLRC5Q86WI3 1866 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 A0A1B0GX51 115 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 GUSBP11Q6P575 273 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 LINC00312Q9Y6C7 94 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM258P61165 79 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM167AQ8TBQ9 72 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 NRGNQ92686 78 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 EFNA4P52798 201 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 C3orf36Q3SXR2 165 aa10.3□□□□□ -0.76
VAMP4-201ENST00000236192 RPUSD1Q9UJJ7 312 aaKnown RBP10.3□□□□□ -0.76
VAMP4-201ENST00000236192 SUMO2P61956 95 aaKnown RBP10.29□□□□□ -0.76
VAMP4-201ENST00000236192 TFF2Q03403 129 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 SP5Q6BEB4 398 aaPredicted RBP10.29□□□□□ -0.76
VAMP4-201ENST00000236192 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM14CQ9P0S9 112 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 H3BT86 120 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 TTTY12Q9BZ98 90 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 PDE6HQ13956 83 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 PCOLCEQ15113 449 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
VAMP4-201ENST00000236192 PRR19A6NJB7 356 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 GATA3P23771 443 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 ZNF503Q96F45 646 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 Q8TCH9 128 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 J3QQQ9 107 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 C21orf62Q9NYP8 219 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 TRBV19A0A075B6N1 114 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 VCYO14598 125 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 CECR9P0C854 216 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 CNTFRP26992 372 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
VAMP4-201ENST00000236192 DTX2Q86UW9 622 aa10.28□□□□□ -0.76
VAMP4-201ENST00000236192 C10orf55Q5SWW7 151 aa10.27□□□□□ -0.76
VAMP4-201ENST00000236192 LINC00643Q86TS7 51 aa10.27□□□□□ -0.76
VAMP4-201ENST00000236192 Q8TAT8 98 aa10.27□□□□□ -0.76
VAMP4-201ENST00000236192 SHANK2-AS3Q9BTD1 123 aa10.27□□□□□ -0.76
VAMP4-201ENST00000236192 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
VAMP4-201ENST00000236192 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
VAMP4-201ENST00000236192 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
VAMP4-201ENST00000236192 DENND4CQ5VZ89 1909 aa10.27□□□□□ -0.77
VAMP4-201ENST00000236192 Q71RC1 249 aaPredicted RBP10.26□□□□□ -0.77
VAMP4-201ENST00000236192 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 KNCNA6PVL3 124 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 SMIM2Q9BVW6 85 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 IGLV2-14P01704 120 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 CD28P10747 220 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 COX6A1P12074 109 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 CXCL12P48061 93 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
VAMP4-201ENST00000236192 NDUFA4L2Q9NRX3 87 aa10.26□□□□□ -0.77
VAMP4-201ENST00000236192 IGHV1OR15-9A0A0B4J2B8 117 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 IGHV5-10-1A0A0J9YXX1 117 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 SOCS3O14543 225 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 PRRG2O14669 202 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 LOXL1Q08397 574 aaPredicted RBP10.25□□□□□ -0.77
VAMP4-201ENST00000236192 OBSL1O75147 1896 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 TIMM23O14925 209 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 SS18L1O75177 396 aaPredicted RBP10.25□□□□□ -0.77
VAMP4-201ENST00000236192 IMUPQ9GZP8 106 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 PKIGQ9Y2B9 76 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 RBM3P98179 157 aaKnown RBP10.25□□□□□ -0.77
VAMP4-201ENST00000236192 CD177Q8N6Q3 437 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 FAM167A-AS1Q96KT0 104 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 PRSS22Q9GZN4 317 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 METRNQ9UJH8 293 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 RFPL3SP0C7P2 107 aa10.25□□□□□ -0.77
VAMP4-201ENST00000236192 S4R3C0 116 aa10.24□□□□□ -0.77
VAMP4-201ENST00000236192 TRAV41A0A0B4J266 112 aa10.24□□□□□ -0.77
VAMP4-201ENST00000236192 FAM19A5Q7Z5A7 132 aaPredicted RBP10.24□□□□□ -0.77
VAMP4-201ENST00000236192 MAFAQ8NHW3 353 aaPredicted RBP10.24□□□□□ -0.77
VAMP4-201ENST00000236192 PHF3Q92576 2039 aaKnown RBP10.24□□□□□ -0.77
VAMP4-201ENST00000236192 ECSCRQ19T08 205 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 Q6ZS52 159 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 CDIP1Q9H305 208 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 IGLV3-12A0A075B6K2 115 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 TEX49A0A1B0GTD5 131 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 IGKV2D-26A0A0A0MRZ7 120 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 TRAV26-2A0A0B4J265 109 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 SRD5A1P18405 259 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
VAMP4-201ENST00000236192 PRR25Q96S07 402 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 MOB4Q9Y3A3 225 aa10.23□□□□□ -0.77
VAMP4-201ENST00000236192 IGKV3-7A0A075B6H7 116 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 BRK1Q8WUW1 75 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 SCN10AQ9Y5Y9 1956 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms