RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 Q6ZQT7 251 aa4.56□□□□□ -1.68
RFX4-201ENST00000229387 PCP2Q8IVA1 136 aa4.56□□□□□ -1.68
RFX4-201ENST00000229387 TMEM86BQ8N661 226 aa4.56□□□□□ -1.68
RFX4-201ENST00000229387 Q8N7P7 452 aa4.56□□□□□ -1.68
RFX4-201ENST00000229387 RND1Q92730 232 aa4.56□□□□□ -1.68
RFX4-201ENST00000229387 FOXA2Q9Y261 457 aaPredicted RBP4.56□□□□□ -1.68
RFX4-201ENST00000229387 PMS2P5A8MQ11 134 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 ATP5LO75964 103 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 NCR2O95944 276 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 IAPPP10997 89 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 GGNQ86UU5 652 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 MBD3L2Q8NHZ7 208 aaPredicted RBP4.55□□□□□ -1.68
RFX4-201ENST00000229387 DPH3Q96FX2 82 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 ODF3Q96PU9 254 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 CHCHD5Q9BSY4 110 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 SPTA1P02549 2419 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 IGKV1-12A0A0C4DH73 117 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 MRPL33O75394 65 aaKnown RBP4.55□□□□□ -1.68
RFX4-201ENST00000229387 IGKV1D-12P01611 117 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 TFF1P04155 84 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 UBE2D3P61077 147 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 UBE2D2P62837 147 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 OR1C1Q15619 314 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 KLF17Q5JT82 389 aaPredicted RBP4.55□□□□□ -1.68
RFX4-201ENST00000229387 HRCT1Q6UXD1 115 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 MLST8Q9BVC4 326 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 CADP27708 2225 aa4.55□□□□□ -1.68
RFX4-201ENST00000229387 A0A0G2JRQ6 117 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 MPDU1O75352 247 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 ARL14EPLP0DKL9 152 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 B3GALT5-AS1P59052 145 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 TMEM258P61165 79 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 KLRB1Q12918 225 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 IGFBPL1Q8WX77 278 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 IGF2BP2-AS1Q96M15 143 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 JPT2Q9H910 190 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 COL12A1Q99715 3063 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 CCL11P51671 97 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 FXYD3Q14802 87 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 ZNF672Q499Z4 452 aaPredicted RBP4.54□□□□□ -1.68
RFX4-201ENST00000229387 HES3Q5TGS1 186 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 ABHD12Q8N2K0 398 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 POM121L12Q8N7R1 296 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 RFESDQ8TAC1 157 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 TCF19Q9Y242 345 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 RAXQ9Y2V3 346 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 TRBV25-1A0A075B6N4 114 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 CLDN14O95500 239 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 HBBP68871 147 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 SPANXN5Q5MJ07 72 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 ZNF818PQ6ZRF7 136 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 RPRMLQ8N4K4 120 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 C15orf53Q8NAA6 179 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 PCNX1Q96RV3 2341 aa4.54□□□□□ -1.68
RFX4-201ENST00000229387 TPRP12270 2363 aaKnown RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 IGLV3-32A0A0A0MS00 114 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 CDX4O14627 284 aaPredicted RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 PGLYRP1O75594 196 aaPredicted RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 GCHFRP30047 84 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 Q6ZRM9 215 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 ZNF808Q8N4W9 903 aaPredicted RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 TIMD4Q96H15 378 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 SLC25A2Q9BXI2 301 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 CCL28Q9NRJ3 127 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 OTOGLQ3ZCN5 2332 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 OVOL1O14753 267 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 IL4P05112 153 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 RPL35AP18077 110 aaKnown RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 PLA2G5P39877 138 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 TFF3Q07654 80 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 EBI3Q14213 229 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 SERTAD4-AS1Q5TG53 156 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 FAM27BQ5VT28 67 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 Q6ZR03 302 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 C3orf56Q8N813 242 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 FAM57AQ8TBR7 257 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 TTTY12Q9BZ98 90 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 F11RQ9Y624 299 aaKnown RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 PTPRBP23467 1997 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 TRAV8-2A0A0B4J237 113 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 FAM240AA0A1B0GVK7 77 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 NPIPB11E5RHQ5 1161 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 CHEK1O14757 476 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 FAM53AQ6NSI3 398 aaPredicted RBP4.53□□□□□ -1.68
RFX4-201ENST00000229387 DEFB124Q8NES8 71 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 CACNG5Q9UF02 275 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 WDR83OSQ9Y284 106 aa4.53□□□□□ -1.68
RFX4-201ENST00000229387 CEP295Q9C0D2 2601 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 ACACAQ13085 2346 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 MYMXA0A1B0GTQ4 84 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 RBAKDNA6NC62 111 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 LYZL6O75951 148 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 LTAP01374 205 aa4.52□□□□□ -1.69
RFX4-201ENST00000229387 CD59P13987 128 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms