RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 LINC00469Q8N7U9 141 aa17.02■□□□□ 0.32
HOXC8-201ENST00000040584 OR1B1Q8NGR6 318 aa17.02■□□□□ 0.32
HOXC8-201ENST00000040584 ORM2P19652 201 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 USF2Q15853 346 aaPredicted RBP17.01■□□□□ 0.31
HOXC8-201ENST00000040584 USMG5Q96IX5 58 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 TRBV7-1A0A0A6YYK4 115 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 IGHV3-11P01762 117 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 CTSGP08311 255 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 NBEAP1P0C6P0 100 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 PSG1P11464 419 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 C2orf88Q9BSF0 95 aa17.01■□□□□ 0.31
HOXC8-201ENST00000040584 SAMD10Q9BYL1 202 aa17■□□□□ 0.31
HOXC8-201ENST00000040584 A0A1B0GUS0 222 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 TMEM89A2RUT3 159 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 SLC25A5P05141 298 aaKnown RBP16.99■□□□□ 0.31
HOXC8-201ENST00000040584 RPLP1P05386 114 aaKnown RBP16.99■□□□□ 0.31
HOXC8-201ENST00000040584 FOXE3Q13461 319 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 FMC1Q96HJ9 113 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 ATP6V0BQ99437 205 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 PGPA6NDG6 321 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 ZNF705FA8MVS1 300 aaPredicted RBP16.99■□□□□ 0.31
HOXC8-201ENST00000040584 TOMM40O96008 361 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 APCSP02743 223 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 ZNF705DP0CH99 300 aaPredicted RBP16.99■□□□□ 0.31
HOXC8-201ENST00000040584 ZNF705BP0CI00 300 aaPredicted RBP16.99■□□□□ 0.31
HOXC8-201ENST00000040584 KLHDC1Q8N7A1 406 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 C5orf17Q8NAS9 161 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 NUDT10Q8NFP7 164 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 NUDT11Q96G61 164 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 GPR82Q96P67 336 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 GNB4Q9HAV0 340 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 RNF24Q9Y225 148 aa16.99■□□□□ 0.31
HOXC8-201ENST00000040584 A0A0G2JLM5 398 aa16.98■□□□□ 0.31
HOXC8-201ENST00000040584 LINC00310P59036 64 aa16.98■□□□□ 0.31
HOXC8-201ENST00000040584 ATP5L2Q7Z4Y8 100 aa16.98■□□□□ 0.31
HOXC8-201ENST00000040584 TSKUQ8WUA8 353 aa16.98■□□□□ 0.31
HOXC8-201ENST00000040584 ATG101Q9BSB4 218 aa16.98■□□□□ 0.31
HOXC8-201ENST00000040584 TMEM14CQ9P0S9 112 aa16.98■□□□□ 0.31
HOXC8-201ENST00000040584 KIR2DL5BA0A0G2JN68 375 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 KIR2DL5BA0A0G2JPC4 375 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 GPX1P07203 203 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 ELANEP08246 267 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 KIR2DL5AQ8N109 375 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 LINC00479Q96M42 142 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 C16orf95Q9H693 158 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 HIGD1AQ9Y241 93 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 IGHV3-35A0A0C4DH35 117 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 SCGB2A1O75556 95 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 TRBV12-3P01733 135 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 TCL1AP56279 114 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 Q6ZWC4 215 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 LINC01006Q8NI28 216 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 ZNF586Q9NXT0 402 aa16.97■□□□□ 0.31
HOXC8-201ENST00000040584 MRPL27Q9P0M9 148 aaKnown RBP16.97■□□□□ 0.31
HOXC8-201ENST00000040584 MAST4O15021 2626 aa16.96■□□□□ 0.31
HOXC8-201ENST00000040584 ZNF253O75346 499 aa16.96■□□□□ 0.31
HOXC8-201ENST00000040584 SSTP61278 116 aa16.96■□□□□ 0.31
HOXC8-201ENST00000040584 CT83Q5H943 113 aa16.96■□□□□ 0.31
HOXC8-201ENST00000040584 MRPL52Q86TS9 123 aaKnown RBP16.96■□□□□ 0.31
HOXC8-201ENST00000040584 OR4X2Q8NGF9 303 aa16.96■□□□□ 0.31
HOXC8-201ENST00000040584 SPINK4O60575 86 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 FRMD6-AS1P0C7T7 363 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 LYZP61626 148 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 MRPL54Q6P161 138 aaKnown RBP16.95■□□□□ 0.3
HOXC8-201ENST00000040584 TEX43Q6ZNM6 134 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 ZNF414Q96IQ9 312 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 KCNS1Q96KK3 526 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 NIPBLQ6KC79 2804 aaeCLIP16.95■□□□□ 0.3
HOXC8-201ENST00000040584 TEP1Q99973 2627 aaKnown RBP16.95■□□□□ 0.3
HOXC8-201ENST00000040584 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.95■□□□□ 0.3
HOXC8-201ENST00000040584 GP9P14770 177 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 S100A7AQ86SG5 101 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 ZNF491Q8N8L2 437 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 RNF152Q8N8N0 203 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 BLNKQ8WV28 456 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 ZNF492Q9P255 531 aa16.95■□□□□ 0.3
HOXC8-201ENST00000040584 TRAV34A0A0B4J273 112 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 WI2-2373I1.2A0A1W2PRP0 233 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 BMPR1BO00238 502 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 NHLRC2Q8NBF2 726 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 C20orf144Q9BQM9 153 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 MLST8Q9BVC4 326 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 OTORQ9NRC9 128 aa16.94■□□□□ 0.3
HOXC8-201ENST00000040584 NDUFA7O95182 113 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 IL4P05112 153 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 ARL3P36405 182 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 NUP35Q8NFH5 326 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 RNF125Q96EQ8 232 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 A8MWL6 223 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 SRIP30626 198 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 TCTEX1D4Q5JR98 221 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 FAM162BQ5T6X4 162 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 TOMM20LQ6UXN7 152 aa16.93■□□□□ 0.3
HOXC8-201ENST00000040584 FAM231BA6NCW3 169 aa16.92■□□□□ 0.3
HOXC8-201ENST00000040584 LTAP01374 205 aa16.92■□□□□ 0.3
HOXC8-201ENST00000040584 ZNF600Q6ZNG1 722 aa16.92■□□□□ 0.3
HOXC8-201ENST00000040584 GFRA4Q9GZZ7 299 aa16.92■□□□□ 0.3
HOXC8-201ENST00000040584 Q9H3A6 140 aa16.92■□□□□ 0.3
HOXC8-201ENST00000040584 SETD2Q9BYW2 2564 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms