RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 IGKV1D-17A0A075B6S4 117 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 GAS1P54826 345 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
CLN5-208ENST00000636183 A0A087WV48 116 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 PSME4Q14997 1843 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 TRGV9Q99603 122 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
CLN5-208ENST00000636183 PLEKHB2Q96CS7 222 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 KLK5Q9Y337 293 aaPredicted RBP13.04□□□□□ -0.32
CLN5-208ENST00000636183 IGKV1D-12P01611 117 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 CFHR2P36980 270 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 NIT1Q86X76 327 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 C5orf30Q96GV9 206 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 COL4A1P02462 1669 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 IGHG3P01860 377 aa13.04□□□□□ -0.32
CLN5-208ENST00000636183 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
CLN5-208ENST00000636183 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 CLPSL1A2RUU4 121 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 CCL24O00175 119 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
CLN5-208ENST00000636183 C5orf24Q7Z6I8 188 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
CLN5-208ENST00000636183 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 OCC1Q8TAD7 63 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 GTF3C1Q12789 2109 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 ESM1Q9NQ30 184 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 HEATR1Q9H583 2144 aaKnown RBP13.03□□□□□ -0.32
CLN5-208ENST00000636183 ACACAQ13085 2346 aa13.03□□□□□ -0.32
CLN5-208ENST00000636183 FAM90A9PA6NNJ1 464 aa13.02□□□□□ -0.32
CLN5-208ENST00000636183 ZFP36P26651 326 aaKnown RBP13.02□□□□□ -0.32
CLN5-208ENST00000636183 DERL1Q9BUN8 251 aa13.02□□□□□ -0.32
CLN5-208ENST00000636183 ABCA1O95477 2261 aa13.02□□□□□ -0.32
CLN5-208ENST00000636183 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
CLN5-208ENST00000636183 SERF1AO75920 110 aa13.02□□□□□ -0.32
CLN5-208ENST00000636183 TREML4Q6UXN2 200 aa13.02□□□□□ -0.33
CLN5-208ENST00000636183 TIMM21Q9BVV7 248 aa13.02□□□□□ -0.33
CLN5-208ENST00000636183 LIME1Q9H400 295 aa13.02□□□□□ -0.33
CLN5-208ENST00000636183 A0A0A6YYD4 124 aa13.02□□□□□ -0.33
CLN5-208ENST00000636183 MYMXA0A1B0GTQ4 84 aa13.02□□□□□ -0.33
CLN5-208ENST00000636183 A0A1B0GUS0 222 aa13.02□□□□□ -0.33
CLN5-208ENST00000636183 TRAV8-3A0A0A6YYJ7 113 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 DEFB112Q30KQ8 113 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 C15orf53Q8NAA6 179 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 MMP23AO75900 390 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 RPP25LQ8N5L8 163 aaKnown RBP13.01□□□□□ -0.33
CLN5-208ENST00000636183 TSKUQ8WUA8 353 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 VSIRQ9H7M9 311 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 hADV29S1A0JD25 119 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 FAM120AOSQ5T036 256 aa13.01□□□□□ -0.33
CLN5-208ENST00000636183 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
CLN5-208ENST00000636183 LRCOL1A6NCL2 159 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGHV4-59P01825 116 aa13□□□□□ -0.33
CLN5-208ENST00000636183 NBL1P41271 181 aa13□□□□□ -0.33
CLN5-208ENST00000636183 DDTP30046 118 aa13□□□□□ -0.33
CLN5-208ENST00000636183 C8orf86Q6ZUL3 223 aa13□□□□□ -0.33
CLN5-208ENST00000636183 ATP6V0BQ99437 205 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGHV3-30P01768 117 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGHV3-33P01772 117 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGHV3-30-3P0DP02 117 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGHV3-30-5P0DP03 117 aa13□□□□□ -0.33
CLN5-208ENST00000636183 GP9P14770 177 aa13□□□□□ -0.33
CLN5-208ENST00000636183 HGFACQ04756 655 aa13□□□□□ -0.33
CLN5-208ENST00000636183 MGST2Q99735 147 aa13□□□□□ -0.33
CLN5-208ENST00000636183 RFNGQ9Y644 331 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGKV1-27A0A075B6S5 117 aa13□□□□□ -0.33
CLN5-208ENST00000636183 IGKV1D-8A0A087WSZ0 117 aa13□□□□□ -0.33
CLN5-208ENST00000636183 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13□□□□□ -0.33
CLN5-208ENST00000636183 MLANAQ16655 118 aa13□□□□□ -0.33
CLN5-208ENST00000636183 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
CLN5-208ENST00000636183 TMEM243Q9BU79 118 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 IGHV4-4A0A075B6R2 117 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 CD5LO43866 347 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 OSTCQ9NRP0 149 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 NDUFB8O95169 186 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 GAGE2EQ4V326 116 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 GAGE2DQ9UEU5 116 aa12.99□□□□□ -0.33
CLN5-208ENST00000636183 IFITM3Q01628 133 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 RSPO3Q9BXY4 272 aaPredicted RBP12.98□□□□□ -0.33
CLN5-208ENST00000636183 ARMS2P0C7Q2 107 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 ZNF503Q96F45 646 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 IGLL5B9A064 214 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 LY6G5BQ8NDX9 201 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 SPOCK3Q9BQ16 436 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 NDUFS7O75251 213 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 ZNF362Q5T0B9 420 aaPredicted RBP12.98□□□□□ -0.33
CLN5-208ENST00000636183 C8orf49Q96NF6 230 aa12.98□□□□□ -0.33
CLN5-208ENST00000636183 A0A1B0GV90 55 aa12.97□□□□□ -0.33
CLN5-208ENST00000636183 IGKV1-16P04430 117 aa12.97□□□□□ -0.33
CLN5-208ENST00000636183 LINC00473A8K010 186 aa12.97□□□□□ -0.33
CLN5-208ENST00000636183 TIRAPP58753 221 aa12.97□□□□□ -0.33
CLN5-208ENST00000636183 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
CLN5-208ENST00000636183 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
CLN5-208ENST00000636183 GAGE2AQ6NT46 116 aa12.97□□□□□ -0.33
CLN5-208ENST00000636183 SHISA3A0PJX4 238 aa12.96□□□□□ -0.33
CLN5-208ENST00000636183 TRAV9-1A0A075B6T8 112 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms