RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 MT-ND6P03923 174 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 MT-ATP8P03928 68 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 SLC25A5P05141 298 aaKnown RBP3.56□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF136P52737 540 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 DEFB103AP81534 67 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 EBI3Q14213 229 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 RSPO1Q2MKA7 263 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-213ENST00000630925 COA6Q5JTJ3 125 aaKnown RBP3.56□□□□□ -1.84
SDCBP-213ENST00000630925 FAM57AQ8TBR7 257 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 MYH13Q9UKX3 1938 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 TANC1Q9C0D5 1861 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 PARP14Q460N5 1801 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 IGHV4-30-2A0A087WSY4 118 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 IGHV1-45A0A0A0MS14 117 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 BUB1B-PAK6H3BSN5 160 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 J3QKU1 62 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 BGLAPP02818 100 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 SRP19P09132 144 aaKnown RBP3.56□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF883P0CG24 379 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 HLA-DRB4P13762 266 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 AKR1C1Q04828 323 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 FOXF1Q12946 379 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 C9orf153Q5TBE3 101 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 MORN3Q6PF18 240 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-213ENST00000630925 H2AFVQ71UI9 128 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 GTSCR1Q86UQ5 136 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 NFE4Q86UQ8 179 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 SLC25A42Q86VD7 318 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 C10orf126Q8N4M7 172 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 OR4B1Q8NGF8 309 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 OR4X2Q8NGF9 303 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 OR1J4Q8NGS1 313 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 PYGO2Q9BRQ0 406 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 SEC11CQ9BY50 192 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 NAA60Q9H7X0 242 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 NOP16Q9Y3C1 178 aaKnown RBP3.56□□□□□ -1.84
SDCBP-213ENST00000630925 HLA-DRB4X5D2U9 266 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 MYH7BA7E2Y1 1941 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 SPTA1P02549 2419 aa3.56□□□□□ -1.84
SDCBP-213ENST00000630925 MUC21A0A0G2JKD1 596 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 TRBV27A0A0K0K1C4 114 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 OOSP1A8MZH6 123 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 HRASP01112 189 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 CGAP01215 116 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 NMBP08949 121 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF286BP0CG31 522 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 CRYGAP11844 174 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 MPGP29372 298 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 CRISP3P54108 245 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 LINC00205P59089 165 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 HERVK_113P61574 105 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 HBBP68871 147 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 CYCSP99999 105 aaKnown RBP3.55□□□□□ -1.84
SDCBP-213ENST00000630925 Q0VG73 95 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 ORMDL2Q53FV1 153 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 LAIR2Q6ISS4 152 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 CEMP1Q6PRD7 247 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-213ENST00000630925 TMEM91Q6ZNR0 172 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 C10orf82Q8WW14 230 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 SLC25A22Q9H936 323 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 TMEM106BQ9NUM4 274 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 DPM3Q9P2X0 92 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 ATAD5Q96QE3 1844 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 A0A087WW49 117 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 C9JCJ5 164 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 M0R2P5 195 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 NDUFB2O95178 105 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 C1QAP02745 245 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 LINC00032P0C843 101 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 COX7A1P24310 79 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 LMO2P25791 158 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 Q56UQ5 140 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 CASC10Q5T4H9 136 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 FAM53AQ6NSI3 398 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-213ENST00000630925 OR5H2Q8NGV7 314 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 NEUROG1Q92886 237 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 VSIG2Q96IQ7 327 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 POLR2J2Q9GZM3 115 aaKnown RBP3.55□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF286AQ9HBT8 521 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 FAM60AQ9NP50 221 aa3.55□□□□□ -1.84
SDCBP-213ENST00000630925 C2CD3Q4AC94 2353 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 IGKV1-9A0A0C4DH69 117 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 NDUFB3O43676 98 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 DUSP14O95147 198 aaKnown RBP3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BOP23527 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BBP33778 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 SRP14P37108 136 aaKnown RBP3.54□□□□□ -1.84
SDCBP-213ENST00000630925 PROK1P58294 105 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BDP58876 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 FGF12P61328 243 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BCP62807 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 CCL20P78556 96 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST2H2BEQ16778 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 LGALS9BQ3B8N2 356 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.54□□□□□ -1.84
SDCBP-213ENST00000630925 AADACL3Q5VUY0 350 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms