RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ZNF362Q5T0B9 420 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 TANC2Q9HCD6 1990 aa9.57□□□□□ -0.88
SHPRH-211ENST00000629427 DAD1P61803 113 aa9.57□□□□□ -0.88
SHPRH-211ENST00000629427 SSBP2P81877 361 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-211ENST00000629427 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-211ENST00000629427 SEC11AP67812 179 aa9.57□□□□□ -0.88
SHPRH-211ENST00000629427 PRR30Q53SZ7 412 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-211ENST00000629427 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
SHPRH-211ENST00000629427 LY6G6FQ5SQ64 297 aa9.57□□□□□ -0.88
SHPRH-211ENST00000629427 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-211ENST00000629427 AGMATQ9BSE5 352 aa9.57□□□□□ -0.88
SHPRH-211ENST00000629427 H0YIZ8 118 aa9.57□□□□□ -0.88
SHPRH-211ENST00000629427 ARHGAP21Q5T5U3 1957 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 TRAV8-1A0A0A6YYK1 113 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 MST1P26927 711 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 C5orf24Q7Z6I8 188 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 SPXQ9BT56 116 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 NCOR1O75376 2440 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 SUPT4H1P63272 117 aaKnown RBP9.56□□□□□ -0.88
SHPRH-211ENST00000629427 ZNF562Q6V9R5 426 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-211ENST00000629427 ZNF561-AS1K7EIQ3 104 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 Q6ZS92 163 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 IL17RELQ6ZVW7 336 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 IGKV1D-17A0A075B6S4 117 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 NDUFS8O00217 210 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 DKK1O94907 266 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 GATA3P23771 443 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 ZNF479Q96JC4 524 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 GFI1Q99684 422 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 ANAPC10Q9UM13 185 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 SMKR1H3BMG3 65 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
SHPRH-211ENST00000629427 LINC00473A8K010 186 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 K7ENP7 123 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 SMPXQ9UHP9 88 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 NTF4P34130 210 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 LINC01619G3V211 115 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 OVOL3O00110 214 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 Q6P435 159 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 NEUROG3Q9Y4Z2 214 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 KIAA1671Q9BY89 1806 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 EREGO14944 169 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 CGB7P0DN87 165 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 BMPERQ8N8U9 685 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 HSD52Q0P140 79 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 PRIMA1Q86XR5 153 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 LURAP1LQ8IV03 231 aa9.55□□□□□ -0.88
SHPRH-211ENST00000629427 PNRC2Q9NPJ4 139 aaKnown RBP9.55□□□□□ -0.88
SHPRH-211ENST00000629427 GLRX5Q86SX6 157 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 TMEM158Q8WZ71 300 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BKO60814 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BJP06899 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BOP23527 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BBP33778 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BDP58876 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BCP62807 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST2H2BEQ16778 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 SPINK13Q1W4C9 94 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-211ENST00000629427 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BHQ93079 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BNQ99877 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HIST1H2BMQ99879 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-211ENST00000629427 GAS1P54826 345 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 COL4A6Q14031 1691 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 A6NNC1 897 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 LIME1Q9H400 295 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 ZNRD1Q9P1U0 126 aa9.54□□□□□ -0.88
SHPRH-211ENST00000629427 C5orf63A6NC05 138 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 PLXNB3Q9ULL4 1909 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 MYMXA0A1B0GTQ4 84 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 VWC2LB2RUY7 222 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 E9PQ18 207 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 HGFACQ04756 655 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 GAGE2EQ4V326 116 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 EDA2RQ9HAV5 297 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 GAGE2DQ9UEU5 116 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 APOC4P55056 127 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 RFNGQ9Y644 331 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 PRTN3P24158 256 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 LYPD1Q8N2G4 141 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 MLANAQ16655 118 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
SHPRH-211ENST00000629427 MPZP25189 248 aa9.52□□□□□ -0.88
SHPRH-211ENST00000629427 C2orf82Q6UX34 121 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms