RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RBP4P02753 201 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 LINC00869P0C866 280 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 ACTL10Q5JWF8 245 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 ARL6IP6Q8N6S5 226 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 IMMP2LQ96T52 175 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 BET1LQ9NYM9 111 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 PRNDQ9UKY0 176 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 DMRT1Q9Y5R6 373 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 ARL2-SNX15V9GYD0 113 aa3.73□□□□□ -1.81
LINC00550-201ENST00000629293 A0A1W2PPV4 95 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SRRM4A7MD48 611 aaKnown RBP3.72□□□□□ -1.81
LINC00550-201ENST00000629293 INS-IGF2F8WCM5 200 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 IGKV1-16P04430 117 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 MYOD1P15172 320 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 GCHFRP30047 84 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 MYCNOSP40205 109 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 ATP5IP56385 69 aaPredicted RBP3.72□□□□□ -1.81
LINC00550-201ENST00000629293 ADAMTSL5Q6ZMM2 481 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 PQLC2Q6ZP29 291 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF114Q8NC26 417 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR9G1Q8NH87 305 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 DERL1Q9BUN8 251 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 YTHDF2Q9Y5A9 579 aaKnown RBP3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR51B2Q9Y5P1 312 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 IGLV1-47P01700 117 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 S100A2P29034 98 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 UBE2G2P60604 165 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 C2orf83Q53S99 150 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 CASC10Q5T4H9 136 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SPATA31B1PQ5VZV4 182 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 FAM71F2Q6NXP2 309 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM183AQ8IXX5 376 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 C8orf31Q8N9H6 132 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 NECAP1Q8NC96 275 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR11H1Q8NG94 326 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BLQ99880 126 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SLC35D1Q9NTN3 355 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 ZMAT5Q9UDW3 170 aaKnown RBP3.72□□□□□ -1.81
LINC00550-201ENST00000629293 CSMD3Q7Z407 3707 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SCO2A0A1W2PP80 73 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 C3orf84H3BNL1 204 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SAP30O75446 220 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 NDUFB4O95168 129 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 AREGP15514 252 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 RHOBP62745 196 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 RTL8BQ17RB0 113 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 C9orf66Q5T8R8 295 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 SBSPONQ8IVN8 264 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 C5orf56Q8N8D9 126 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR10D4PQ8NGN7 298 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR1L8Q8NGR8 309 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR2T10Q8NGZ9 312 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 OR5B3Q8NH48 314 aa3.72□□□□□ -1.81
LINC00550-201ENST00000629293 RNASEH2CQ8TDP1 164 aaKnown RBP3.72□□□□□ -1.81
LINC00550-201ENST00000629293 IGKV1OR2-108A0A075B7D4 117 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 TEX50A0A1B0GTY4 177 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 PPP5D1E7EU14 171 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 H0YJW9 148 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 J3QR06 171 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 SAA1P0DJI8 122 aaPredicted RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 RNASE2P10153 161 aaKnown RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 HIST1H1BP16401 226 aaKnown RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 IL3RAP26951 378 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF137PP52743 207 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 LINC00311Q8N616 119 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 OR1P1Q8NH06 330 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 ACY3Q96HD9 319 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 SLC35E1Q96K37 410 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 RASL11BQ9BPW5 248 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 MRPL20Q9BYC9 149 aaKnown RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 PLEKHA3Q9HB20 300 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 ENY2Q9NPA8 101 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF256Q9Y2P7 627 aaPredicted RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 AMMECR1Q9Y4X0 333 aaPredicted RBP3.71□□□□□ -1.82
LINC00550-201ENST00000629293 LY96Q9Y6Y9 160 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 RYR2Q92736 4967 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 A0A1W2PPQ1 181 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 C9JCJ5 164 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 KCNIP4Q6PIL6 250 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 ST6GALNAC6Q969X2 333 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 ZNF503Q96F45 646 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 SFRP2Q96HF1 295 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 NDUFA4L2Q9NRX3 87 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 FKBP11Q9NYL4 201 aa3.71□□□□□ -1.82
LINC00550-201ENST00000629293 VCYO14598 125 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 AMBPP02760 352 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 OR5G3P0C626 314 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 CHRNA7P36544 502 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 RAB31Q13636 194 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 GAMTQ14353 236 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 PDZD11Q5EBL8 140 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 MIR17HGQ75NE6 70 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 OR4A5Q8NH83 315 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 TMEM167AQ8TBQ9 72 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 BTF3L4Q96K17 158 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 PACRGQ96M98 296 aaPredicted RBP3.7□□□□□ -1.82
LINC00550-201ENST00000629293 FUT9Q9Y231 359 aa3.7□□□□□ -1.82
LINC00550-201ENST00000629293 TRAV9-1A0A075B6T8 112 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms