RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 VSIRQ9H7M9 311 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 GNB4Q9HAV0 340 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 OSTCQ9NRP0 149 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 TECRQ9NZ01 308 aaKnown RBP4.06□□□□□ -1.76
SHMT1-211ENST00000618902 IL36BQ9NZH7 164 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 KLK9Q9UKQ9 250 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 RNF24Q9Y225 148 aa4.06□□□□□ -1.76
SHMT1-211ENST00000618902 TEX50A0A1B0GTY4 177 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 A0A1W2PRX2 142 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 ZNF320A2RRD8 509 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 HELTA6NFD8 242 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 FAM223BA6NKX1 122 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 IFITM10A6NMD0 228 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 A8MWP6 167 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 PRSS46E5RG02 174 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 ISLRO14498 428 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 NDUFB4O95168 129 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 CNIH1O95406 144 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 OR5G3P0C626 314 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 GZMBP10144 247 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 NPY1RP25929 384 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 GCHFRP30047 84 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 RPL27AP46776 148 aaKnown RBP4.05□□□□□ -1.76
SHMT1-211ENST00000618902 MFAP2P55001 183 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 FGF8P55075 233 aaPredicted RBP4.05□□□□□ -1.76
SHMT1-211ENST00000618902 TPPP2P59282 170 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 RPL8P62917 257 aaKnown RBP4.05□□□□□ -1.76
SHMT1-211ENST00000618902 PRR20EP86478 221 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 PRR20CP86479 221 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 PRR20DP86480 221 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 PRR20BP86481 221 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 PRR20AP86496 221 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 TIGITQ495A1 244 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 OR10J3Q5JRS4 329 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 C9orf66Q5T8R8 295 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 UNQ5815/PRO19632Q6UWF5 114 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 TOMM20LQ6UXN7 152 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 FAM223AQ8IWN6 122 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 LINC00482Q8N8I6 264 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 ZNF491Q8N8L2 437 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 KLHL30-AS1Q8NEE0 82 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 SLC24A4Q8NFF2 622 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 OR10W1Q8NGF6 305 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 OR1L6Q8NGR2 347 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 OR1L4Q8NGR5 311 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 MS4A10Q96PG2 267 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 C2orf88Q9BSF0 95 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 SIGLEC8Q9NYZ4 499 aa4.05□□□□□ -1.76
SHMT1-211ENST00000618902 HUWE1Q7Z6Z7 4374 aaKnown RBP4.05□□□□□ -1.76
SHMT1-211ENST00000618902 A0A1W2PPQ1 181 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 CORTO00230 105 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 NXPH3O95157 252 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 AMBPP02760 352 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 NHLRC4P0CG21 123 aaPredicted RBP4.04□□□□□ -1.76
SHMT1-211ENST00000618902 PRCDQ00LT1 54 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 ZNF90Q03938 601 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 WT1-ASQ06250 92 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 DEFB136Q30KP8 78 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 SPINK9Q5DT21 86 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 KHDC1LQ5JSQ8 128 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 C1orf194Q5T5A4 169 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 C8orf86Q6ZUL3 223 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 FAM231DQ6ZW35 169 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 GBGT1Q8N5D6 347 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 TTC9CQ8N5M4 171 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 TMEM37Q8WXS4 190 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 RAX2Q96IS3 184 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 FANCD2OSQ96PS1 177 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 ELOVL1Q9BW60 279 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 GGTLC1Q9BX51 225 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 COMMD5Q9GZQ3 224 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 ZFAND3Q9H8U3 227 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 SLC25A22Q9H936 323 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 NDUFA4L2Q9NRX3 87 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 THYN1Q9P016 225 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 FUT9Q9Y231 359 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 OR51B2Q9Y5P1 312 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 RFNGQ9Y644 331 aa4.04□□□□□ -1.76
SHMT1-211ENST00000618902 NBEAL2Q6ZNJ1 2754 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 IGLV11-55A0A075B6I3 123 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 FAM231BA6NCW3 169 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 NPIPB5A8MRT5 1133 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 LINC01619G3V211 115 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 NDUFB8O95169 186 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 TRBV12-3P01733 135 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 IGHV3-11P01762 117 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 HLA-DQA1P01909 254 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 TRGV3P03979 118 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 CRYGCP07315 174 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 LGALS1P09382 135 aaKnown RBP4.03□□□□□ -1.76
SHMT1-211ENST00000618902 C8orf88P0DMB2 117 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 S100A7P31151 101 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 GNG4P50150 75 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 RHOGP84095 191 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 RPEL1Q2QD12 228 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 FAM78BQ5VT40 261 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 ZNF600Q6ZNG1 722 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms