RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 G3V318 75 aa13.67□□□□□ -0.22
CNOT3-209ENST00000617930 C5orf56Q8N8D9 126 aa13.67□□□□□ -0.22
CNOT3-209ENST00000617930 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
CNOT3-209ENST00000617930 KCNS1Q96KK3 526 aa13.67□□□□□ -0.22
CNOT3-209ENST00000617930 SNHG12Q9BXW3 62 aa13.67□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF331Q9NQX6 463 aaPredicted RBP13.67□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF586Q9NXT0 402 aa13.67□□□□□ -0.22
CNOT3-209ENST00000617930 TRAV34A0A0B4J273 112 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 WI2-2373I1.2A0A1W2PRP0 233 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 TOMM40O96008 361 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 CA1P00915 261 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-209ENST00000617930 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF705AQ6ZN79 300 aaPredicted RBP13.66□□□□□ -0.22
CNOT3-209ENST00000617930 C7orf69Q9H7B7 122 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 TEX15Q9BXT5 2789 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 IGHV4-31P0DP07 118 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 SRIP30626 198 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 NUTF2P61970 127 aaKnown RBP13.66□□□□□ -0.22
CNOT3-209ENST00000617930 WFDC11Q8NEX6 87 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 VAMP8Q9BV40 100 aa13.66□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF253O75346 499 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 APCSP02743 223 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 PMCHP20382 165 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 KRTDAPP60985 99 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 CIARTQ8N365 385 aaPredicted RBP13.65□□□□□ -0.22
CNOT3-209ENST00000617930 STXBP6Q8NFX7 210 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF48Q96MX3 618 aaPredicted RBP13.65□□□□□ -0.22
CNOT3-209ENST00000617930 C21orf62Q9NYP8 219 aa13.65□□□□□ -0.22
CNOT3-209ENST00000617930 PGPA6NDG6 321 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 GNG7O60262 68 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 IL4P05112 153 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 GPX1P07203 203 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 CTSGP08311 255 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 AMTP48728 403 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 MFAP4P55083 255 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 UBE2G1P62253 170 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 ECSCRQ19T08 205 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 LINC01356Q8N9X3 169 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 RNF125Q96EQ8 232 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 SGK494Q96LW2 274 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 SHANK2-AS3Q9BTD1 123 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 CHRDL1Q9BU40 450 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 TMUB1Q9BVT8 246 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 FBXL7Q9UJT9 491 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 PAM16Q9Y3D7 125 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 OR2T8A6NH00 312 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 H3BRN7 92 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 BMPR1BO00238 502 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 KLK9Q2XQG4 91 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 UNQ5815/PRO19632Q6UWF5 114 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 FAM231DQ6ZW35 169 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 GRAMD2BQ96HH9 432 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 C20orf144Q9BQM9 153 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 KLK9Q9UKQ9 250 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 EPDR1Q9UM22 224 aa13.64□□□□□ -0.23
CNOT3-209ENST00000617930 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
CNOT3-209ENST00000617930 Q56UQ5 140 aa13.63□□□□□ -0.23
CNOT3-209ENST00000617930 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
CNOT3-209ENST00000617930 RCHY1Q96PM5 261 aa13.63□□□□□ -0.23
CNOT3-209ENST00000617930 TCAPO15273 167 aa13.63□□□□□ -0.23
CNOT3-209ENST00000617930 TMEM14CQ9P0S9 112 aa13.63□□□□□ -0.23
CNOT3-209ENST00000617930 TGFAP01135 160 aa13.62□□□□□ -0.23
CNOT3-209ENST00000617930 SLC25A5P05141 298 aaKnown RBP13.62□□□□□ -0.23
CNOT3-209ENST00000617930 PRB4P10163 310 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-209ENST00000617930 RAB4AP20338 218 aa13.62□□□□□ -0.23
CNOT3-209ENST00000617930 TDRG1Q3Y452 100 aa13.62□□□□□ -0.23
CNOT3-209ENST00000617930 Q71RC1 249 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-209ENST00000617930 Q9H3A6 140 aa13.62□□□□□ -0.23
CNOT3-209ENST00000617930 NRN1Q9NPD7 142 aa13.62□□□□□ -0.23
CNOT3-209ENST00000617930 RPH3ALQ9UNE2 315 aa13.62□□□□□ -0.23
CNOT3-209ENST00000617930 A0A1W2PS18 150 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 DIRC3C9JPN6 131 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 EXOC3-AS1Q8N2X6 119 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 NUDT10Q8NFP7 164 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 NUDT11Q96G61 164 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 MIEN1Q9BRT3 115 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 ATG101Q9BSB4 218 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
CNOT3-209ENST00000617930 TRAV30A0A087WSZ9 112 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 ZNF324O75467 553 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-209ENST00000617930 IGLC2P0DOY2 106 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 HIST1H1EP10412 219 aaKnown RBP13.61□□□□□ -0.23
CNOT3-209ENST00000617930 FCGR2BP31994 310 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-209ENST00000617930 C15orf32Q32M92 178 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 C19orf54Q5BKX5 351 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 PRSS57Q6UWY2 283 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 WIPF2Q8TF74 440 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-209ENST00000617930 KLF12Q9Y4X4 402 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 RNF114Q9Y508 228 aa13.61□□□□□ -0.23
CNOT3-209ENST00000617930 IGHV3-35A0A0C4DH35 117 aa13.6□□□□□ -0.23
CNOT3-209ENST00000617930 SLAQ13239 276 aa13.6□□□□□ -0.23
CNOT3-209ENST00000617930 OR4B1Q8NGF8 309 aa13.6□□□□□ -0.23
CNOT3-209ENST00000617930 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms