RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
HDDC2-209ENST00000609477 MRPL32Q9BYC8 188 aaKnown RBP10.42□□□□□ -0.74
HDDC2-209ENST00000609477 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
HDDC2-209ENST00000609477 ZNF331Q9NQX6 463 aaPredicted RBP10.42□□□□□ -0.74
HDDC2-209ENST00000609477 ZNF705EA8MWA4 302 aaPredicted RBP10.41□□□□□ -0.74
HDDC2-209ENST00000609477 C4BPBP20851 252 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 PSG9Q00887 426 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 PDE6HQ13956 83 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 ZNF266Q14584 549 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 PSG3Q16557 428 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 GDF5OSQ5U4N7 250 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 FAM78BQ5VT40 261 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 MORN5Q5VZ52 161 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
HDDC2-209ENST00000609477 A0A0J9YWU9 116 aa10.4□□□□□ -0.74
HDDC2-209ENST00000609477 AMBPP02760 352 aa10.4□□□□□ -0.74
HDDC2-209ENST00000609477 MIFP14174 115 aa10.4□□□□□ -0.74
HDDC2-209ENST00000609477 INO80EQ8NBZ0 244 aaPredicted RBP10.4□□□□□ -0.74
HDDC2-209ENST00000609477 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
HDDC2-209ENST00000609477 OR4B1Q8NGF8 309 aa10.4□□□□□ -0.74
HDDC2-209ENST00000609477 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.74
HDDC2-209ENST00000609477 TIMM9Q9Y5J7 89 aa10.4□□□□□ -0.74
HDDC2-209ENST00000609477 HIST1H1EP10412 219 aaKnown RBP10.39□□□□□ -0.75
HDDC2-209ENST00000609477 RNF182Q8N6D2 247 aa10.39□□□□□ -0.75
HDDC2-209ENST00000609477 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
HDDC2-209ENST00000609477 NEU1Q99519 415 aa10.39□□□□□ -0.75
HDDC2-209ENST00000609477 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
HDDC2-209ENST00000609477 TRAV5A0A0B4J249 113 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 F6UB75 175 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 H3BQ15 152 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 OR8A1Q8NGG7 326 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
HDDC2-209ENST00000609477 TRBV19A0A075B6N1 114 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 CNN1P51911 297 aaKnown RBP10.37□□□□□ -0.75
HDDC2-209ENST00000609477 DEFB1P60022 68 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 RHOBP62745 196 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 IGFL4Q6B9Z1 124 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
HDDC2-209ENST00000609477 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
HDDC2-209ENST00000609477 MRPL53Q96EL3 112 aaKnown RBP10.37□□□□□ -0.75
HDDC2-209ENST00000609477 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 WFDC1Q9HC57 220 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 PRELID1Q9Y255 219 aa10.37□□□□□ -0.75
HDDC2-209ENST00000609477 ZNF705FA8MVS1 300 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-209ENST00000609477 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 ZNF705DP0CH99 300 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-209ENST00000609477 ZNF705BP0CI00 300 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-209ENST00000609477 TAS2R45P59539 299 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 ACOT6Q3I5F7 207 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-209ENST00000609477 Q5BKY6 102 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 Q8NAQ8 132 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 PSMG3Q9BT73 122 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-209ENST00000609477 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 TNFSF18Q9UNG2 199 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 X6R8D5 127 aa10.36□□□□□ -0.75
HDDC2-209ENST00000609477 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 SLC17A3O00476 420 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 NBEAP1P0C6P0 100 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 M6PRP20645 277 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 SERF2P84101 59 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 KHDC3LQ587J8 217 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 OR2G3Q8NGZ4 309 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 IGF2BP2-AS1Q96M15 143 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
HDDC2-209ENST00000609477 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 TAAR5O14804 337 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 MBP02144 154 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 HLA-DMBP28068 263 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
HDDC2-209ENST00000609477 LYPD1Q8N2G4 141 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 PAXXQ9BUH6 204 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 PPP1R14DQ9NXH3 145 aa10.34□□□□□ -0.75
HDDC2-209ENST00000609477 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 A0A1W2PPV4 95 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 NDUFB4O95168 129 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 SNRPCP09234 159 aaKnown RBP10.33□□□□□ -0.76
HDDC2-209ENST00000609477 PYYP10082 97 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 RNF141Q8WVD5 230 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
HDDC2-209ENST00000609477 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
HDDC2-209ENST00000609477 G3V3Q6 166 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms