RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 FOXF1Q12946 379 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 SMCO1Q147U7 214 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 MMDQ15546 238 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 C1orf140Q5VVS0 124 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 IZUMO2Q6UXV1 221 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 LINC01551Q86U37 167 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 PACRGLQ8N7B6 248 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 PFN4Q8NHR9 129 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 MAFIPQ8WZ33 124 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 NARS2Q96I59 477 aaKnown RBP2.58□□□□□ -2
IGHV3-29-201ENST00000604817 ABHD14BQ96IU4 210 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 TSSK6Q9BXA6 273 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 GABARAPL1Q9H0R8 117 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 VCXQ9H320 206 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 ZNF230Q9UIE0 474 aaPredicted RBP2.58□□□□□ -2
IGHV3-29-201ENST00000604817 MCTS1Q9ULC4 181 aaKnown RBP2.58□□□□□ -2
IGHV3-29-201ENST00000604817 TENM3Q9P273 2699 aa2.58□□□□□ -2
IGHV3-29-201ENST00000604817 DOCK11Q5JSL3 2073 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 PLXNB1O43157 2135 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 TRAV27A0A087WT01 109 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 A0A0J9YW62 118 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 LOC100130705A0A1B0GUX0 176 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 TMEM223A0PJW6 202 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ARRDC5A6NEK1 342 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 CDC42EP2O14613 210 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 RGS5O15539 181 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 OR7C2O60412 319 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 NDUFB2O95178 105 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 IGF2P01344 180 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 HLA-DRB1P01911 266 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ASAH2BP0C7U1 165 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ZNF823P16415 610 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 CRABP1P29762 137 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 TGFBR1P36897 503 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 RPS10P46783 165 aaKnown RBP2.57□□□□□ -2
IGHV3-29-201ENST00000604817 AQP4P55087 323 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 UBA52P62987 128 aaKnown RBP2.57□□□□□ -2
IGHV3-29-201ENST00000604817 C12orf74Q32Q52 190 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 WDR86Q86TI4 376 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 OSR2Q8N2R0 312 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ANKRD29Q8N6D5 301 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 GDPD1Q8N9F7 314 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 DNAJC9Q8WXX5 260 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 CNBD2Q96M20 576 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 CCL13Q99616 98 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 B9D2Q9BPU9 175 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 TMEM147Q9BVK8 224 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 BPESC1Q9GZL8 116 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 TMEM222Q9H0R3 208 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 TVP23BQ9NYZ1 205 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ZNRD1Q9P1U0 126 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ENOPH1Q9UHY7 261 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 PRNDQ9UKY0 176 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 ARHGAP32A7KAX9 2087 aa2.57□□□□□ -2
IGHV3-29-201ENST00000604817 IGHV3-15A0A0B4J1V0 119 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IGHV3-43A0A0B4J1X8 118 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IGHV1-69-2A0A0G2JMI3 117 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 LOC102725191A0A1B0GVB3 256 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IGSF23A1L1A6 192 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IZUMO1RA6ND01 250 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 LST1O00453 97 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 PHOX2AO14813 284 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 HMGB3O15347 200 aaKnown RBP2.56□□□□□ -2
IGHV3-29-201ENST00000604817 LYZL6O75951 148 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IGLV1-47P01700 117 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 HLA-DQB1P01920 261 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 CD14P08571 375 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 TSPAN19P0C672 248 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 CD28P10747 220 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 SPI1P17947 270 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 GZMHP20718 246 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 S100GP29377 79 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 FXYD6P3P58550 94 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 FLI1Q01543 452 aaPredicted RBP2.56□□□□□ -2
IGHV3-29-201ENST00000604817 RPL18Q07020 188 aaKnown RBP2.56□□□□□ -2
IGHV3-29-201ENST00000604817 FABP9Q0Z7S8 132 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 RPL13AP3Q6NVV1 102 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 BAP18Q8IXM2 172 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 MKXQ8IYA7 352 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 ZNF433Q8N7K0 673 aaPredicted RBP2.56□□□□□ -2
IGHV3-29-201ENST00000604817 OR8D4Q8NGM9 314 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 OR5J2Q8NH18 312 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 OR52N1Q8NH53 320 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 OR4A5Q8NH83 315 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 BORCS5Q969J3 196 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 GNPNAT1Q96EK6 184 aaPredicted RBP2.56□□□□□ -2
IGHV3-29-201ENST00000604817 Q96M85 177 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 ERMAPQ96PL5 475 aaPredicted RBP2.56□□□□□ -2
IGHV3-29-201ENST00000604817 SHANK2-AS3Q9BTD1 123 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 Q9H521 79 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 TNFRSF19Q9NS68 423 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 C21orf62Q9NYP8 219 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 TAAR3PQ9P1P4 343 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 ZNF222Q9UK12 451 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 BAIAP2Q9UQB8 552 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IER3IP1Q9Y5U9 82 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 COL7A1Q02388 2944 aa2.56□□□□□ -2
IGHV3-29-201ENST00000604817 IGHV3OR15-7A0A075B7D8 119 aa2.55□□□□□ -2
IGHV3-29-201ENST00000604817 RIIAD1A6NNX1 92 aa2.55□□□□□ -2
IGHV3-29-201ENST00000604817 A8MUN3 132 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms