RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 CST9LP1Q5W188 147 aa14.08□□□□□ -0.16
SSBP4-212ENST00000601919 LYPD1Q8N2G4 141 aa14.08□□□□□ -0.16
SSBP4-212ENST00000601919 SMDT1Q9H4I9 107 aa14.08□□□□□ -0.16
SSBP4-212ENST00000601919 SMAD5-AS1Q9Y6J3 95 aa14.08□□□□□ -0.16
SSBP4-212ENST00000601919 LOC102723971A0A1B0GUV8 181 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 EDN2P20800 178 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 RIPPLY3P57055 190 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 PAFAH1B2P68402 229 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 TOR2AQ5JU69 321 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 ZNF506Q5JVG8 444 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 SLC50A1Q9BRV3 221 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 AAMDCQ9H7C9 122 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 NRN1Q9NPD7 142 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 MLXQ9UH92 298 aa14.07□□□□□ -0.16
SSBP4-212ENST00000601919 FAM74A7A6NL05 159 aa14.06□□□□□ -0.16
SSBP4-212ENST00000601919 RANP62826 216 aaKnown RBP14.06□□□□□ -0.16
SSBP4-212ENST00000601919 MEF2BQ02080 365 aaPredicted RBP14.06□□□□□ -0.16
SSBP4-212ENST00000601919 UQCC3Q6UW78 93 aa14.06□□□□□ -0.16
SSBP4-212ENST00000601919 ADAMTSL5Q6ZMM2 481 aa14.06□□□□□ -0.16
SSBP4-212ENST00000601919 OTORQ9NRC9 128 aa14.06□□□□□ -0.16
SSBP4-212ENST00000601919 CLEC5AQ9NY25 188 aa14.06□□□□□ -0.16
SSBP4-212ENST00000601919 C11orf94C9JXX5 98 aa14.05□□□□□ -0.16
SSBP4-212ENST00000601919 NDUFS6O75380 124 aaKnown RBP14.05□□□□□ -0.16
SSBP4-212ENST00000601919 SNRPCP09234 159 aaKnown RBP14.05□□□□□ -0.16
SSBP4-212ENST00000601919 FAM90A2PQ658T7 463 aa14.05□□□□□ -0.16
SSBP4-212ENST00000601919 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.05□□□□□ -0.16
SSBP4-212ENST00000601919 RBPMS2Q6ZRY4 209 aaKnown RBP14.05□□□□□ -0.16
SSBP4-212ENST00000601919 TCEAL7Q9BRU2 100 aa14.05□□□□□ -0.16
SSBP4-212ENST00000601919 YTHDF2Q9Y5A9 579 aaKnown RBP14.05□□□□□ -0.16
SSBP4-212ENST00000601919 TRAV25A0A0B4J276 109 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 H3BTX0 84 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 SAP30O75446 220 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 DEFB114Q30KQ6 69 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 EIF4E3Q8N5X7 224 aaKnown RBP14.04□□□□□ -0.16
SSBP4-212ENST00000601919 RXFP4Q8TDU9 374 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 C17orf77Q96MU5 243 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 RARRES2Q99969 163 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 MCRIP2Q9BUT9 160 aaKnown RBP14.04□□□□□ -0.16
SSBP4-212ENST00000601919 Q9H3A6 140 aa14.04□□□□□ -0.16
SSBP4-212ENST00000601919 DNASE2O00115 360 aaPredicted RBP14.03□□□□□ -0.16
SSBP4-212ENST00000601919 PDE6DO43924 150 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 NDUFB4O95168 129 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 CD33P20138 364 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 ID1P41134 155 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 SUMO1P63165 101 aaKnown RBP14.03□□□□□ -0.16
SSBP4-212ENST00000601919 ICAM4Q14773 271 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 OR2K2Q8NGT1 345 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 C16orf92Q96LL3 132 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 TREM1Q9NP99 234 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 ZNF331Q9NQX6 463 aaPredicted RBP14.03□□□□□ -0.16
SSBP4-212ENST00000601919 PRELID1Q9Y255 219 aa14.03□□□□□ -0.16
SSBP4-212ENST00000601919 FBN1P35555 2871 aaKnown RBP14.02□□□□□ -0.16
SSBP4-212ENST00000601919 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 PGPA6NDG6 321 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 F6UZH7 168 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 INSL3P51460 131 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 CMTM2Q8TAZ6 248 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 MS4A6AQ9H2W1 248 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 TENM1Q9UKZ4 2725 aa14.02□□□□□ -0.17
SSBP4-212ENST00000601919 IGKV3-7A0A075B6H7 116 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 GGTLC3B5MD39 225 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 SLC17A3O00476 420 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 ISLRO14498 428 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 TSPAN4O14817 238 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 CSN1S1P47710 185 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 ATP5G3P48201 142 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 C9orf66Q5T8R8 295 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 ARL6IP6Q8N6S5 226 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 C5orf17Q8NAS9 161 aa14.01□□□□□ -0.17
SSBP4-212ENST00000601919 SLC25A5P05141 298 aaKnown RBP14□□□□□ -0.17
SSBP4-212ENST00000601919 CD81P60033 236 aa14□□□□□ -0.17
SSBP4-212ENST00000601919 CD300EQ496F6 205 aaPredicted RBP14□□□□□ -0.17
SSBP4-212ENST00000601919 CCDC28AQ8IWP9 274 aa14□□□□□ -0.17
SSBP4-212ENST00000601919 EXOC3-AS1Q8N2X6 119 aa14□□□□□ -0.17
SSBP4-212ENST00000601919 GBGT1Q8N5D6 347 aa14□□□□□ -0.17
SSBP4-212ENST00000601919 MRPL53Q96EL3 112 aaKnown RBP14□□□□□ -0.17
SSBP4-212ENST00000601919 SPAG8Q99932 426 aaPredicted RBP14□□□□□ -0.17
SSBP4-212ENST00000601919 TMEM250H0YL14 139 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 SNRPD3P62318 126 aaKnown RBP13.99□□□□□ -0.17
SSBP4-212ENST00000601919 LCN12Q6JVE5 192 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 SLC7A5P1Q8MH63 180 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 TMEM61Q8N0U2 210 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 DCANP1Q8TF63 244 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 HIST1H2BAQ96A08 127 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 RPUSD4Q96CM3 377 aaKnown RBP13.99□□□□□ -0.17
SSBP4-212ENST00000601919 SLC35B3Q9H1N7 401 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 SELENOKQ9Y6D0 94 aa13.99□□□□□ -0.17
SSBP4-212ENST00000601919 OR4C46A6NHA9 309 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 K7EQG2 157 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 SOCS3O14543 225 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 IGLV1-51P01701 117 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 SRSF3P84103 164 aaKnown RBP13.98□□□□□ -0.17
SSBP4-212ENST00000601919 WFDC3Q8IUB2 231 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 CITED4Q96RK1 184 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 GPR61Q9BZJ8 451 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 EPDR1Q9UM22 224 aa13.98□□□□□ -0.17
SSBP4-212ENST00000601919 SERTM2A0A1B0GWG4 89 aa13.97□□□□□ -0.17
SSBP4-212ENST00000601919 K7EQM0 130 aa13.97□□□□□ -0.17
SSBP4-212ENST00000601919 SRP19P09132 144 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms