RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 A0A0J9YX75 114 aa14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 SMLR1H3BR10 107 aa14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 SPRY2O43597 315 aa14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 CA1P00915 261 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 ATF4P18848 351 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 MIR17HGQ75NE6 70 aa14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 BPIFA4PQ86YQ2 179 aa14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 SLC25A2Q9BXI2 301 aa14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 ZNF331Q9NQX6 463 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-221ENST00000599833 SPP1P10451 314 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 CXCL2P19875 107 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 ZNF709Q8N972 641 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 HRH4Q9H3N8 390 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 ZNF586Q9NXT0 402 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 TMEM14CQ9P0S9 112 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 RNF24Q9Y225 148 aa14.21□□□□□ -0.13
SHKBP1-221ENST00000599833 RYR2Q92736 4967 aa14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 H3BTX0 84 aa14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 MORN3Q6PF18 240 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 AMTNQ6UX39 209 aa14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 Q6ZNX1 250 aa14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF503Q96F45 646 aa14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 TENM2Q9NT68 2774 aa14.2□□□□□ -0.14
SHKBP1-221ENST00000599833 FXYD6-FXYD2A0A087WZ82 144 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 NDUFB4O95168 129 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 IFNA5P01569 189 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 PYYP10082 97 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 FAM78BQ5VT40 261 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 LCN15Q6UWW0 184 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 OR11H4Q8NGC9 324 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 KCNIP2Q9NS61 270 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 RPRMQ9NS64 109 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 ALMS1Q8TCU4 4167 aa14.19□□□□□ -0.14
SHKBP1-221ENST00000599833 C17orf112F2Z3M2 114 aa14.18□□□□□ -0.14
SHKBP1-221ENST00000599833 PRB4P10163 310 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-221ENST00000599833 TIMM9Q9Y5J7 89 aa14.18□□□□□ -0.14
SHKBP1-221ENST00000599833 PSG3Q16557 428 aa14.17□□□□□ -0.14
SHKBP1-221ENST00000599833 FFAR4Q5NUL3 377 aa14.17□□□□□ -0.14
SHKBP1-221ENST00000599833 SCGB1C1Q8TD33 95 aa14.17□□□□□ -0.14
SHKBP1-221ENST00000599833 SLC50A1Q9BRV3 221 aa14.17□□□□□ -0.14
SHKBP1-221ENST00000599833 MRPL32Q9BYC8 188 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-221ENST00000599833 FUT9Q9Y231 359 aa14.17□□□□□ -0.14
SHKBP1-221ENST00000599833 TRBV19A0A075B6N1 114 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF705EA8MWA4 302 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF253O75346 499 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 IGKV3-20P01619 116 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF705DP0CH99 300 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF705BP0CI00 300 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 OR2G3Q8NGZ4 309 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 FXYD5Q96DB9 178 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 SLC35B3Q9H1N7 401 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 CYTL1Q9NRR1 136 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 CLEC5AQ9NY25 188 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 X6R8D5 127 aa14.16□□□□□ -0.14
SHKBP1-221ENST00000599833 HYDINQ4G0P3 5121 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF705FA8MVS1 300 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 PRAC2D3DTV9 90 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 EIF3GO75821 320 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 HIST1H1EP10412 219 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 ATP6V0CP27449 155 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 CNN1P51911 297 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 ZNF266Q14584 549 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 GUK1Q16774 197 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 TMEM41BQ5BJD5 291 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 RPL7L1Q6DKI1 246 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 MUC7Q8TAX7 377 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 ST6GAL2Q96JF0 529 aa14.15□□□□□ -0.14
SHKBP1-221ENST00000599833 A0A0J9YWU9 116 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 RAB2AP61019 212 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 EBLN2Q6P2I7 272 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 Q8NAQ8 132 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 HSD17B11Q8NBQ5 300 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 INO80EQ8NBZ0 244 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 OR8A1Q8NGG7 326 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 PSMG3Q9BT73 122 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 SH3BGRL3Q9H299 93 aa14.14□□□□□ -0.15
SHKBP1-221ENST00000599833 ARPC5O15511 151 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 FXYD7P58549 80 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 ZNF705AQ6ZN79 300 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 ZNF738Q8NE65 137 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 OR4B1Q8NGF8 309 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 OR11H2Q8NH07 326 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 RPUSD4Q96CM3 377 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 RARRES2Q99969 163 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 XCL2Q9UBD3 114 aa14.13□□□□□ -0.15
SHKBP1-221ENST00000599833 CRXO43186 299 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-221ENST00000599833 M6PRP20645 277 aa14.12□□□□□ -0.15
SHKBP1-221ENST00000599833 PSG9Q00887 426 aa14.12□□□□□ -0.15
SHKBP1-221ENST00000599833 PDE6HQ13956 83 aa14.12□□□□□ -0.15
SHKBP1-221ENST00000599833 OR51M1Q9H341 326 aa14.12□□□□□ -0.15
SHKBP1-221ENST00000599833 HMSDA8MTL9 139 aa14.11□□□□□ -0.15
SHKBP1-221ENST00000599833 RPP25LQ8N5L8 163 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-221ENST00000599833 LRRC20Q8TCA0 184 aa14.11□□□□□ -0.15
SHKBP1-221ENST00000599833 MFFQ9GZY8 342 aa14.11□□□□□ -0.15
SHKBP1-221ENST00000599833 C11orf68Q9H3H3 251 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-221ENST00000599833 C3orf84H3BNL1 204 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 M0R3E3 92 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 OR10J4P0C629 311 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 RBMY1A1P0DJD3 496 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 RBMY1CP0DJD4 496 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms