RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 AMBPP02760 352 aa10.77□□□□□ -0.69
LIG1-215ENST00000597901 CAMLGP49069 296 aa10.77□□□□□ -0.69
LIG1-215ENST00000597901 RAB32Q13637 225 aa10.77□□□□□ -0.69
LIG1-215ENST00000597901 DNAJC4Q9NNZ3 241 aa10.77□□□□□ -0.69
LIG1-215ENST00000597901 DKK2Q9UBU2 259 aa10.77□□□□□ -0.69
LIG1-215ENST00000597901 LOC102723971A0A1B0GUV8 181 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 M0R2Z0 102 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
LIG1-215ENST00000597901 COX7A2P2O60397 106 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 SNRPCP09234 159 aaKnown RBP10.76□□□□□ -0.69
LIG1-215ENST00000597901 S100A11P31949 105 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 S100A10P60903 97 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 SPINK13Q1W4C9 94 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 RRN3P1Q2M238 152 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 FAM222AQ5U5X8 452 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 C10orf113Q5VZT2 155 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 Q6ZRG5 221 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 NRARPQ7Z6K4 114 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 TMEM252Q8N6L7 170 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 OR8A1Q8NGG7 326 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 TMEM208Q9BTX3 173 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 LYRM2Q9NU23 88 aaPredicted RBP10.76□□□□□ -0.69
LIG1-215ENST00000597901 UQCC1Q9NVA1 299 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 WDR83OSQ9Y284 106 aa10.76□□□□□ -0.69
LIG1-215ENST00000597901 IGSF23A1L1A6 192 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 UPK1BO75841 260 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 PRM2P04554 102 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 SULT1A1P50225 295 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 RHOBP62745 196 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 IFITM3Q01628 133 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 MORN5Q5VZ52 161 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 MIC13Q5XKP0 118 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 BPIFA4PQ86YQ2 179 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 NIPSNAP3BQ9BS92 247 aa10.75□□□□□ -0.69
LIG1-215ENST00000597901 YTHDF2Q9Y5A9 579 aaKnown RBP10.75□□□□□ -0.69
LIG1-215ENST00000597901 ZNF705GA8MUZ8 300 aaPredicted RBP10.74□□□□□ -0.69
LIG1-215ENST00000597901 PRB4P10163 310 aaPredicted RBP10.74□□□□□ -0.69
LIG1-215ENST00000597901 HIST1H1AQ02539 215 aaPredicted RBP10.74□□□□□ -0.69
LIG1-215ENST00000597901 OPCMLQ14982 345 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 OXA1LQ15070 435 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 ATP6V1FQ16864 119 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 ENKURQ8TC29 256 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 RPUSD4Q96CM3 377 aaKnown RBP10.74□□□□□ -0.69
LIG1-215ENST00000597901 GPN1Q9HCN4 374 aaPredicted RBP10.74□□□□□ -0.69
LIG1-215ENST00000597901 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
LIG1-215ENST00000597901 PPP1R14DQ9NXH3 145 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 VPS13DQ5THJ4 4388 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 KMT2AQ03164 3969 aa10.74□□□□□ -0.69
LIG1-215ENST00000597901 TRAV12-2A0A075B6T6 113 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 TRAV5A0A0B4J249 113 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 TEX48A0A1B0GUV7 120 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 H3BTX0 84 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 SIX6O95475 246 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 CXCL2P19875 107 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 RPL29P47914 159 aaKnown RBP10.73□□□□□ -0.69
LIG1-215ENST00000597901 B2MP61769 119 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 LCN15Q6UWW0 184 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 OR1L4Q8NGR5 311 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 CHAC2Q8WUX2 184 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
LIG1-215ENST00000597901 H3BQ15 152 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 INSP01308 110 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 HBG1P69891 147 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 HBG2P69892 147 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 STX12Q86Y82 276 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 BAP18Q8IXM2 172 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 SAT2Q96F10 170 aaPredicted RBP10.72□□□□□ -0.69
LIG1-215ENST00000597901 LINC01587Q99440 93 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 SLC50A1Q9BRV3 221 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 SLC39A9Q9NUM3 307 aa10.72□□□□□ -0.69
LIG1-215ENST00000597901 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 INMT-MINDY4F8WBC2 141 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 RLN2P04090 185 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 IGLC2P0DOY2 106 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 AZU1P20160 251 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 NHLH2Q02577 135 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 BAXQ07812 192 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 FAM210BQ96KR6 192 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 PTTG2Q9NZH5 202 aa10.71□□□□□ -0.69
LIG1-215ENST00000597901 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 SLC17A3O00476 420 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 P0DMU3 169 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 FGF7P21781 194 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 PFDN5Q99471 154 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 NMES1Q9C002 83 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 PXMP4Q9Y6I8 212 aa10.7□□□□□ -0.7
LIG1-215ENST00000597901 E5RGE8 158 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 H0YIZ8 118 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 PRAF2O60831 178 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 HTN3P15516 51 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 TSPOP30536 169 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 CDKN1BP46527 198 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 DAD1P61803 113 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 CYCSP99999 105 aaKnown RBP10.69□□□□□ -0.7
LIG1-215ENST00000597901 GUK1Q16774 197 aa10.69□□□□□ -0.7
LIG1-215ENST00000597901 POM121L12Q8N7R1 296 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms