RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	OR4B1	Q8NGF8	309 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	OR1L4	Q8NGR5	311 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	THAP6	Q8TBB0	222 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	LRRC20	Q8TCA0	184 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	CLUHP3	Q96NS8	147 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	PFDN5	Q99471	154 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	C11orf68	Q9H3H3	251 aa	Known RBP	6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	PXMP4	Q9Y6I8	212 aa		6.68	□□□□□ -1.34
DNMT1-223	ENST00000591239	CXorf65	A6NEN9	183 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	DEFB4A	O15263	64 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	GHRH	P01286	108 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	SNRPC	P09234	159 aa	Known RBP	6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	FXYD7	P58549	80 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	PSG9	Q00887	426 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	PMS2P11	Q13670	270 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	ZNF709	Q8N972	641 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239		Q8NAQ8	132 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	NPCDR1	Q9BY65	106 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	MED28	Q9H204	178 aa		6.67	□□□□□ -1.34
DNMT1-223	ENST00000591239	TRAV5	A0A0B4J249	113 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	IGHV4-28	A0A0C4DH34	117 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239		A8MTW9	85 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	RBMY1A1	P0DJD3	496 aa	Known RBP	6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	RBMY1C	P0DJD4	496 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	MIF	P14174	115 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	CXCL2	P19875	107 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	HLA-DMB	P28068	263 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	RPL12	P30050	165 aa	Known RBP	6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	RBMY1F	Q15415	496 aa	Known RBP	6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	PSG3	Q16557	428 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	LCN15	Q6UWW0	184 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	ZNF738	Q8NE65	137 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	OR11H7	Q8NGC8	314 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	ATP5S	Q99766	215 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	WDR61	Q9GZS3	305 aa	Known RBP	6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	SLC35B3	Q9H1N7	401 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	HRH4	Q9H3N8	390 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	ZNF331	Q9NQX6	463 aa	Predicted RBP	6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	MBD2	Q9UBB5	411 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239	HSPB11	Q9Y547	144 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239		X6R8D5	127 aa		6.66	□□□□□ -1.34
DNMT1-223	ENST00000591239		H3BQ15	152 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239		H3BTX0	84 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	DUSP14	O95147	198 aa	Known RBP	6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	ZNF705D	P0CH99	300 aa	Predicted RBP	6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	ZNF705B	P0CI00	300 aa	Predicted RBP	6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	IGLC2	P0DOY2	106 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	CNN1	P51911	297 aa	Known RBP	6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	FCN2	Q15485	313 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	RGS21	Q2M5E4	152 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	GCSAML	Q5JQS6	135 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	AMTN	Q6UX39	209 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	C11orf45	Q8TAV5	145 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	SAT2	Q96F10	170 aa	Predicted RBP	6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	SLC50A1	Q9BRV3	221 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	MFF	Q9GZY8	342 aa		6.65	□□□□□ -1.34
DNMT1-223	ENST00000591239	IGHV3OR16-12	A0A075B7B8	117 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	NUPR2	A6NF83	97 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	ZNF705F	A8MVS1	300 aa	Predicted RBP	6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	SLC17A3	O00476	420 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	NANOS2	P60321	138 aa	Known RBP	6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	GUK1	Q16774	197 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	ZNF705A	Q6ZN79	300 aa	Predicted RBP	6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	OR8A1	Q8NGG7	326 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	RPUSD4	Q96CM3	377 aa	Known RBP	6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	SMIM3	Q9BZL3	60 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	KCNIP2	Q9NS61	270 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	RYR3	Q15413	4870 aa		6.64	□□□□□ -1.35
DNMT1-223	ENST00000591239	LCE6A	A0A183	80 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	C17orf112	F2Z3M2	114 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239		M0R2Z0	102 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	IFNA5	P01569	189 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	PRB4	P10163	310 aa	Predicted RBP	6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	HIST1H1A	Q02539	215 aa	Predicted RBP	6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	SPINK13	Q1W4C9	94 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	C1orf158	Q8N1D5	194 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	DYNC2H1	Q8NCM8	4307 aa	Known RBP	6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	SCGB1C1	Q8TD33	95 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	IGF2BP2-AS1	Q96M15	143 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	NEU1	Q99519	415 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	WFDC1	Q9HC57	220 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	ZNF586	Q9NXT0	402 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	TMEM14C	Q9P0S9	112 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	GOLT1B	Q9Y3E0	138 aa		6.63	□□□□□ -1.35
DNMT1-223	ENST00000591239	TRBV19	A0A075B6N1	114 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	SMIM9	A6NGZ8	99 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	ZNF253	O75346	499 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	AMBP	P02760	352 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	GIP	P09681	153 aa	Predicted RBP	6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	PYY	P10082	97 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	HIST1H1E	P10412	219 aa	Known RBP	6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	RHOB	P62745	196 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	OXA1L	Q15070	435 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239		Q5BKY6	102 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	FFAR4	Q5NUL3	377 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	MIR17HG	Q75NE6	70 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	ASB13	Q8WXK3	278 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	FAM167A-AS1	Q96KT0	104 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms