RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 ERCC8Q13216 396 aa9.06□□□□□ -0.96
SEH1L-208ENST00000590843 PPBPP02775 128 aa9.06□□□□□ -0.96
SEH1L-208ENST00000590843 ZNF747Q9BV97 191 aa9.06□□□□□ -0.96
SEH1L-208ENST00000590843 A0A087WWC5 75 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 A0A1B0GUT8 65 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 IGLL1P15814 213 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 A0A1W2PPI3 338 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 F8WEM9 126 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 C11orf71Q6IPW1 123 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 Q6ZSV7 163 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 IGF2BP2-AS1Q96M15 143 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 PLXNA2O75051 1894 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 KIF26BQ2KJY2 2108 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 RASL11AQ6T310 242 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 CBLN1P23435 193 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 RUNX1Q01196 453 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 GPHB5Q86YW7 130 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
SEH1L-208ENST00000590843 NAV2Q8IVL1 2488 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 SMIM9A6NGZ8 99 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 TMEM95Q3KNT9 176 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 LOC389332A0A1B0GUA5 103 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 SRSF2Q01130 221 aaKnown RBP9.04□□□□□ -0.96
SEH1L-208ENST00000590843 WNK2Q9Y3S1 2297 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 PMS2P5A8MQ11 134 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 GUSBP1Q15486 140 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 SPINK13Q1W4C9 94 aa9.04□□□□□ -0.96
SEH1L-208ENST00000590843 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 LINC00862A6NCI5 91 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 ZNF503-AS2A6NEH8 195 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 SFTA3P0C7M3 94 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 KIF26AQ9ULI4 1882 aaPredicted RBP9.03□□□□□ -0.96
SEH1L-208ENST00000590843 TRAV10A0A0B4J240 114 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 F8VVB4 439 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 F8VWA3 439 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 VWC2LB2RUY7 222 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 KRTDAPP60985 99 aa9.03□□□□□ -0.96
SEH1L-208ENST00000590843 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
SEH1L-208ENST00000590843 TP53BP1Q12888 1972 aaPredicted RBP9.03□□□□□ -0.96
SEH1L-208ENST00000590843 ANKHD1Q8IWZ3 2542 aaKnown RBP9.02□□□□□ -0.96
SEH1L-208ENST00000590843 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.96
SEH1L-208ENST00000590843 A0A087WW49 117 aa9.02□□□□□ -0.96
SEH1L-208ENST00000590843 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.96
SEH1L-208ENST00000590843 WDR83OSQ9Y284 106 aa9.02□□□□□ -0.96
SEH1L-208ENST00000590843 DOCK9Q9BZ29 2069 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
SEH1L-208ENST00000590843 HBBP68871 147 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 MIR17HGQ75NE6 70 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 LINC00482Q8N8I6 264 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 U3KQK5 164 aa9.02□□□□□ -0.97
SEH1L-208ENST00000590843 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 IGKV1-16P04430 117 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 DEFA6Q01524 100 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 DEFB135Q30KP9 77 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 DUX4L9Q6RFH8 374 aaPredicted RBP9.01□□□□□ -0.97
SEH1L-208ENST00000590843 RAB37Q96AX2 223 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 C20orf144Q9BQM9 153 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 CACNA1DQ01668 2161 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 DIRC3C9JPN6 131 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 SCRT1Q9BWW7 348 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 COL5A1P20908 1838 aaPredicted RBP9.01□□□□□ -0.97
SEH1L-208ENST00000590843 WDR86Q86TI4 376 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 LYPD6Q86Y78 171 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 LINC01006Q8NI28 216 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 NDUFA4L2Q9NRX3 87 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 LY6G6CO95867 125 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 HOXA5P20719 270 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 ADMP35318 185 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 ZNF491Q8N8L2 437 aa9.01□□□□□ -0.97
SEH1L-208ENST00000590843 P0DMU3 169 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 FAM231AP0DMU4 169 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 FAM231CP0DMU5 169 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 FABP4P15090 132 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 GATA2P23769 480 aaPredicted RBP9□□□□□ -0.97
SEH1L-208ENST00000590843 ZNF876PQ49A33 203 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 SCGB3A1Q96QR1 104 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 H3BVH4 76 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 BATFQ16520 125 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 CENPWQ5EE01 88 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 IGHG4P01861 327 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 ERASQ7Z444 233 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 SONP18583 2426 aaKnown RBP9□□□□□ -0.97
SEH1L-208ENST00000590843 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
SEH1L-208ENST00000590843 TRBV9A0A0B4J1U6 114 aa8.99□□□□□ -0.97
SEH1L-208ENST00000590843 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
SEH1L-208ENST00000590843 SELENOKQ9Y6D0 94 aa8.99□□□□□ -0.97
SEH1L-208ENST00000590843 IGHV7-81A0A0B4J1V7 117 aa8.99□□□□□ -0.97
SEH1L-208ENST00000590843 GAGE12JA6NER3 117 aa8.99□□□□□ -0.97
SEH1L-208ENST00000590843 WIPF3A6NGB9 483 aa8.99□□□□□ -0.97
SEH1L-208ENST00000590843 CFHR3Q02985 330 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms