RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 NPCDR1Q9BY65 106 aa12.28□□□□□ -0.44
H3F3B-208ENST00000589599 MED28Q9H204 178 aa12.28□□□□□ -0.44
H3F3B-208ENST00000589599 KCNIP2Q9NS61 270 aa12.28□□□□□ -0.44
H3F3B-208ENST00000589599 DYNC2H1Q8NCM8 4307 aaKnown RBP12.27□□□□□ -0.44
H3F3B-208ENST00000589599 IGHV4-28A0A0C4DH34 117 aa12.27□□□□□ -0.45
H3F3B-208ENST00000589599 NUPR2A6NF83 97 aa12.27□□□□□ -0.45
H3F3B-208ENST00000589599 MRPS12O15235 138 aaKnown RBP12.27□□□□□ -0.45
H3F3B-208ENST00000589599 PSG3Q16557 428 aa12.27□□□□□ -0.45
H3F3B-208ENST00000589599 Q8NAQ8 132 aa12.27□□□□□ -0.45
H3F3B-208ENST00000589599 SLC50A1Q9BRV3 221 aa12.27□□□□□ -0.45
H3F3B-208ENST00000589599 X6R8D5 127 aa12.27□□□□□ -0.45
H3F3B-208ENST00000589599 RYR3Q15413 4870 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 JTBO76095 146 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 CXCL3P19876 107 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 RPL12P30050 165 aaKnown RBP12.26□□□□□ -0.45
H3F3B-208ENST00000589599 GUK1Q16774 197 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-208ENST00000589599 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 HRH4Q9H3N8 390 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 KLK5Q9Y337 293 aaPredicted RBP12.26□□□□□ -0.45
H3F3B-208ENST00000589599 HSPB11Q9Y547 144 aa12.26□□□□□ -0.45
H3F3B-208ENST00000589599 TRAV5A0A0B4J249 113 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 LCE6AA0A183 80 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 C17orf112F2Z3M2 114 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 IFNA5P01569 189 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 AMBPP02760 352 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 RBMY1A1P0DJD3 496 aaKnown RBP12.25□□□□□ -0.45
H3F3B-208ENST00000589599 RBMY1CP0DJD4 496 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 CNN1P51911 297 aaKnown RBP12.25□□□□□ -0.45
H3F3B-208ENST00000589599 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
H3F3B-208ENST00000589599 MORN5Q5VZ52 161 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 SCGB1C1Q8TD33 95 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 ATP5SQ99766 215 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 WDR61Q9GZS3 305 aaKnown RBP12.25□□□□□ -0.45
H3F3B-208ENST00000589599 ZNF331Q9NQX6 463 aaPredicted RBP12.25□□□□□ -0.45
H3F3B-208ENST00000589599 PPP1R14DQ9NXH3 145 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 MBD2Q9UBB5 411 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 GOLT1BQ9Y3E0 138 aa12.25□□□□□ -0.45
H3F3B-208ENST00000589599 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
H3F3B-208ENST00000589599 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
H3F3B-208ENST00000589599 IGLC2P0DOY2 106 aa12.24□□□□□ -0.45
H3F3B-208ENST00000589599 NANOS2P60321 138 aaKnown RBP12.24□□□□□ -0.45
H3F3B-208ENST00000589599 RGS21Q2M5E4 152 aa12.24□□□□□ -0.45
H3F3B-208ENST00000589599 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
H3F3B-208ENST00000589599 PHLDA1Q8WV24 401 aaPredicted RBP12.24□□□□□ -0.45
H3F3B-208ENST00000589599 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
H3F3B-208ENST00000589599 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 A8MTW9 85 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 H3BQ15 152 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 ZNF705DP0CH99 300 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-208ENST00000589599 ZNF705BP0CI00 300 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-208ENST00000589599 HLA-DMBP28068 263 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 RHOBP62745 196 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 HIST1H1AQ02539 215 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-208ENST00000589599 FCN2Q15485 313 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
H3F3B-208ENST00000589599 NEU1Q99519 415 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 TMEM14CQ9P0S9 112 aa12.23□□□□□ -0.45
H3F3B-208ENST00000589599 H3BTX0 84 aa12.22□□□□□ -0.45
H3F3B-208ENST00000589599 AMTNQ6UX39 209 aa12.22□□□□□ -0.45
H3F3B-208ENST00000589599 OR11H7Q8NGC8 314 aa12.22□□□□□ -0.45
H3F3B-208ENST00000589599 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
H3F3B-208ENST00000589599 TMEM208Q9BTX3 173 aa12.22□□□□□ -0.45
H3F3B-208ENST00000589599 SMIM3Q9BZL3 60 aa12.22□□□□□ -0.45
H3F3B-208ENST00000589599 TMEM189A5PLL7 270 aa12.21□□□□□ -0.45
H3F3B-208ENST00000589599 ZNF705FA8MVS1 300 aaPredicted RBP12.21□□□□□ -0.45
H3F3B-208ENST00000589599 HIST1H1EP10412 219 aaKnown RBP12.21□□□□□ -0.45
H3F3B-208ENST00000589599 GCSAMLQ5JQS6 135 aa12.21□□□□□ -0.45
H3F3B-208ENST00000589599 OR10J6PQ8NGY7 276 aa12.21□□□□□ -0.45
H3F3B-208ENST00000589599 ASB13Q8WXK3 278 aa12.21□□□□□ -0.45
H3F3B-208ENST00000589599 SAT2Q96F10 170 aaPredicted RBP12.21□□□□□ -0.45
H3F3B-208ENST00000589599 TIMM9Q9Y5J7 89 aa12.21□□□□□ -0.45
H3F3B-208ENST00000589599 RFNGQ9Y644 331 aa12.21□□□□□ -0.45
H3F3B-208ENST00000589599 SACSQ9NZJ4 4579 aa12.21□□□□□ -0.46
H3F3B-208ENST00000589599 SLC17A3O00476 420 aa12.2□□□□□ -0.46
H3F3B-208ENST00000589599 ZNF253O75346 499 aa12.2□□□□□ -0.46
H3F3B-208ENST00000589599 INSP01308 110 aa12.2□□□□□ -0.46
H3F3B-208ENST00000589599 SPINK13Q1W4C9 94 aa12.2□□□□□ -0.46
H3F3B-208ENST00000589599 MRPL32Q9BYC8 188 aaKnown RBP12.2□□□□□ -0.46
H3F3B-208ENST00000589599 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
H3F3B-208ENST00000589599 BOLA2-SMG1P6H3BVE0 249 aa12.19□□□□□ -0.46
H3F3B-208ENST00000589599 HBE1P02100 147 aa12.19□□□□□ -0.46
H3F3B-208ENST00000589599 C1orf158Q8N1D5 194 aa12.19□□□□□ -0.46
H3F3B-208ENST00000589599 RYR2Q92736 4967 aa12.19□□□□□ -0.46
H3F3B-208ENST00000589599 TRBV19A0A075B6N1 114 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 C11orf94C9JXX5 98 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 M0R2Z0 102 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 GIPP09681 153 aaPredicted RBP12.18□□□□□ -0.46
H3F3B-208ENST00000589599 EMP1P54849 157 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 FFAR4Q5NUL3 377 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 SLC25A2Q9BXI2 301 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
H3F3B-208ENST00000589599 FUT9Q9Y231 359 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 PRELID1Q9Y255 219 aa12.18□□□□□ -0.46
H3F3B-208ENST00000589599 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
H3F3B-208ENST00000589599 PYYP10082 97 aa12.17□□□□□ -0.46
H3F3B-208ENST00000589599 PDE6HQ13956 83 aa12.17□□□□□ -0.46
H3F3B-208ENST00000589599 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
H3F3B-208ENST00000589599 C2CD4CQ8TF44 421 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms