RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CXCL3P19876 107 aa12.88□□□□□ -0.35
SRSF1-208ENST00000584773 MIC13Q5XKP0 118 aa12.88□□□□□ -0.35
SRSF1-208ENST00000584773 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
SRSF1-208ENST00000584773 NRARPQ7Z6K4 114 aa12.88□□□□□ -0.35
SRSF1-208ENST00000584773 BAP18Q8IXM2 172 aa12.88□□□□□ -0.35
SRSF1-208ENST00000584773 TRAV12-2A0A075B6T6 113 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 LOC102723971A0A1B0GUV8 181 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 COX7A2P2O60397 106 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 UPK1BO75841 260 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 CAMLGP49069 296 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
SRSF1-208ENST00000584773 OPCMLQ14982 345 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 FAM222AQ5U5X8 452 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 IGF2BP2-AS1Q96M15 143 aa12.87□□□□□ -0.35
SRSF1-208ENST00000584773 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 HBE1P02100 147 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 SPART-AS1P0CW21 52 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 TCTAP57738 103 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 PSG3Q16557 428 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 LRRC20Q8TCA0 184 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 LYRM2Q9NU23 88 aaPredicted RBP12.86□□□□□ -0.35
SRSF1-208ENST00000584773 UQCC1Q9NVA1 299 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 WDR83OSQ9Y284 106 aa12.86□□□□□ -0.35
SRSF1-208ENST00000584773 YTHDF2Q9Y5A9 579 aaKnown RBP12.86□□□□□ -0.35
SRSF1-208ENST00000584773 ZNF705GA8MUZ8 300 aaPredicted RBP12.85□□□□□ -0.35
SRSF1-208ENST00000584773 SLC17A3O00476 420 aa12.85□□□□□ -0.35
SRSF1-208ENST00000584773 DUSP14O95147 198 aaKnown RBP12.85□□□□□ -0.35
SRSF1-208ENST00000584773 PXDC1Q5TGL8 231 aa12.85□□□□□ -0.35
SRSF1-208ENST00000584773 C10orf113Q5VZT2 155 aa12.85□□□□□ -0.35
SRSF1-208ENST00000584773 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
SRSF1-208ENST00000584773 TMEM208Q9BTX3 173 aa12.85□□□□□ -0.35
SRSF1-208ENST00000584773 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
SRSF1-208ENST00000584773 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 AMBPP02760 352 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 PVALBP20472 110 aaPredicted RBP12.84□□□□□ -0.35
SRSF1-208ENST00000584773 SULT1A1P50225 295 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 RHOBP62745 196 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 BAXQ07812 192 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 VWC2Q2TAL6 325 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
SRSF1-208ENST00000584773 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
SRSF1-208ENST00000584773 H3BQ15 152 aa12.83□□□□□ -0.36
SRSF1-208ENST00000584773 BOLA2-SMG1P6H3BVE0 249 aa12.83□□□□□ -0.36
SRSF1-208ENST00000584773 INSP01308 110 aa12.83□□□□□ -0.36
SRSF1-208ENST00000584773 S100A7AQ86SG5 101 aa12.83□□□□□ -0.36
SRSF1-208ENST00000584773 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
SRSF1-208ENST00000584773 NIPSNAP3BQ9BS92 247 aa12.83□□□□□ -0.36
SRSF1-208ENST00000584773 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
SRSF1-208ENST00000584773 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
SRSF1-208ENST00000584773 HTN3P15516 51 aa12.82□□□□□ -0.36
SRSF1-208ENST00000584773 BPIFA4PQ86YQ2 179 aa12.82□□□□□ -0.36
SRSF1-208ENST00000584773 GPN1Q9HCN4 374 aaPredicted RBP12.82□□□□□ -0.36
SRSF1-208ENST00000584773 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
SRSF1-208ENST00000584773 IGLC2P0DOY2 106 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 AZU1P20160 251 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 FGF7P21781 194 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 S100A11P31949 105 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 RAB31Q13636 194 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 KIR3DS1Q14943 382 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 LRRC37A5PQ49AS3 106 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 STX12Q86Y82 276 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
SRSF1-208ENST00000584773 INMT-MINDY4F8WBC2 141 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 H0YIZ8 118 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 CXCL2P19875 107 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 B2MP61769 119 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 NHLH2Q02577 135 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 GCSAMLQ5JQS6 135 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 Q6ZRG5 221 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 PXMP4Q9Y6I8 212 aa12.8□□□□□ -0.36
SRSF1-208ENST00000584773 RPL29P47914 159 aaKnown RBP12.79□□□□□ -0.36
SRSF1-208ENST00000584773 HBG1P69891 147 aa12.79□□□□□ -0.36
SRSF1-208ENST00000584773 HBG2P69892 147 aa12.79□□□□□ -0.36
SRSF1-208ENST00000584773 THAP6Q8TBB0 222 aa12.79□□□□□ -0.36
SRSF1-208ENST00000584773 SAT2Q96F10 170 aaPredicted RBP12.79□□□□□ -0.36
SRSF1-208ENST00000584773 NDUFAF3Q9BU61 184 aa12.79□□□□□ -0.36
SRSF1-208ENST00000584773 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
SRSF1-208ENST00000584773 DNAH2Q9P225 4427 aa12.78□□□□□ -0.36
SRSF1-208ENST00000584773 PLAC8L1A1L4L8 177 aa12.78□□□□□ -0.36
SRSF1-208ENST00000584773 FCN2Q15485 313 aa12.78□□□□□ -0.36
SRSF1-208ENST00000584773 OR1L4Q8NGR5 311 aa12.78□□□□□ -0.36
SRSF1-208ENST00000584773 ZNF586Q9NXT0 402 aa12.78□□□□□ -0.36
SRSF1-208ENST00000584773 RNF24Q9Y225 148 aa12.78□□□□□ -0.36
SRSF1-208ENST00000584773 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.37
SRSF1-208ENST00000584773 HTN1P15515 57 aa12.77□□□□□ -0.37
SRSF1-208ENST00000584773 DAD1P61803 113 aa12.77□□□□□ -0.37
SRSF1-208ENST00000584773 OR5C1Q8NGR4 320 aa12.77□□□□□ -0.37
SRSF1-208ENST00000584773 LINC01587Q99440 93 aa12.77□□□□□ -0.37
SRSF1-208ENST00000584773 NPCDR1Q9BY65 106 aa12.77□□□□□ -0.37
SRSF1-208ENST00000584773 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
SRSF1-208ENST00000584773 J3KRW8 73 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms