RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CEBPGP53567 150 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TAS2R45P59539 299 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 GFI1BQ5VTD9 330 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 C4orf3Q8WVX3 66 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TECRQ9NZ01 308 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 CXorf1O96002 111 aa10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 C8orf88P0DMB2 117 aa10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 LBHQ53QV2 105 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 COA6Q5JTJ3 125 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 KLHL30-AS1Q8NEE0 82 aa10.63□□□□□ -0.71
CDK5RAP3-219ENST00000580670 IGHV4OR15-8A0A075B7B6 117 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 A0A087WW49 117 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 H3BRN7 92 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 DDTP30046 118 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 UNQ9165/PRO28630Q6UXU0 137 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 S100A7AQ86SG5 101 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 WFDC12Q8WWY7 111 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 CITED2Q99967 270 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 SHANK2-AS3Q9BTD1 123 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 SRD5A3Q9H8P0 318 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 GNG13Q9P2W3 67 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 VAX2Q9UIW0 290 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 ZNF320A2RRD8 509 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TSTD3H0UI37 97 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 ZNF207O43670 478 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 OR7C2O60412 319 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 DEFB136Q30KP8 78 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 FAM167A-AS1Q96KT0 104 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 HIST1H2BLQ99880 126 aa10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-219ENST00000580670 A0A1W2PRX2 142 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PFN1P07737 140 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 FABP4P15090 132 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 GCHFRP30047 84 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 S100A7P31151 101 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 FOXL1Q12952 345 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 FAM106AQ4KMX7 169 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PQLC2Q6ZP29 291 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TMEM190Q8WZ59 177 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PACRGQ96M98 296 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 METTL26Q96S19 204 aa10.61□□□□□ -0.71
CDK5RAP3-219ENST00000580670 IFNA1P01562 189 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 NPPCP23582 126 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 C8orf86Q6ZUL3 223 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 OR11H1Q8NG94 326 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 ZNF503Q96F45 646 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 LINC01619G3V211 115 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 OR10J4P0C629 311 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 HOXD3P31249 432 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TAS2R60P59551 318 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 OR1N2Q8NGR9 330 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 DPF1Q92782 380 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 C2orf88Q9BSF0 95 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PAXXQ9BUH6 204 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 NAT8Q9UHE5 227 aa10.6□□□□□ -0.71
CDK5RAP3-219ENST00000580670 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PYYP10082 97 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 CRYBB3P26998 211 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PSMB3P49720 205 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 KRTAP10-3P60369 221 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 STXBP6Q8NFX7 210 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
CDK5RAP3-219ENST00000580670 SLURP1P55000 103 aa10.58□□□□□ -0.72
CDK5RAP3-219ENST00000580670 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-219ENST00000580670 PDZD11Q5EBL8 140 aa10.58□□□□□ -0.72
CDK5RAP3-219ENST00000580670 RNF24Q9Y225 148 aa10.58□□□□□ -0.72
CDK5RAP3-219ENST00000580670 IGHV3OR16-13A0A075B7E8 117 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 IGHV3-74A0A0B4J1X5 117 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 IGHV3-66A0A0C4DH42 116 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TMEM250H0YL14 139 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 BUB3O43684 328 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 GCGP01275 180 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 APOHP02749 345 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 GP9P14770 177 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TMEM241Q24JQ0 296 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TM4SF20Q53R12 229 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 PRIMA1Q86XR5 153 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 BPIFA4PQ86YQ2 179 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 DAZ1Q9NQZ3 744 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TMEM167BQ9NRX6 74 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 TMEM14CQ9P0S9 112 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 U3KQE9 123 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 A0A1B0GV90 55 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 A8MWP6 167 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 K7EMT4 169 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 AMBPP02760 352 aa10.57□□□□□ -0.72
CDK5RAP3-219ENST00000580670 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms