RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 DCANP1Q8TF63 244 aa9.08□□□□□ -0.96
CCDC84-209ENST00000580556 FAM110AQ9BQ89 295 aa9.08□□□□□ -0.96
CCDC84-209ENST00000580556 HRH4Q9H3N8 390 aa9.08□□□□□ -0.96
CCDC84-209ENST00000580556 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
CCDC84-209ENST00000580556 BOLA1Q9Y3E2 137 aa9.08□□□□□ -0.96
CCDC84-209ENST00000580556 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
CCDC84-209ENST00000580556 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 CTXND1A0A1B0GTU2 59 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 PDE6HQ13956 83 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 C17orf77Q96MU5 243 aa9.07□□□□□ -0.96
CCDC84-209ENST00000580556 K7EQG2 157 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 DNASE2O00115 360 aaPredicted RBP9.06□□□□□ -0.96
CCDC84-209ENST00000580556 SOCS3O14543 225 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 OR7C2O60412 319 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 ZNF253O75346 499 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 HIST1H1EP10412 219 aaKnown RBP9.06□□□□□ -0.96
CCDC84-209ENST00000580556 SULT1A2P50226 295 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 GUCA2BQ16661 112 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 PAXXQ9BUH6 204 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 OR51M1Q9H341 326 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
CCDC84-209ENST00000580556 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
CCDC84-209ENST00000580556 ISLRO14498 428 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 PSMB3P49720 205 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 CMC4P56277 68 aaPredicted RBP9.05□□□□□ -0.96
CCDC84-209ENST00000580556 UBE2L3P68036 154 aaKnown RBP9.05□□□□□ -0.96
CCDC84-209ENST00000580556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 GTSCR1Q86UQ5 136 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 SUN5Q8TC36 379 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 FXYD5Q96DB9 178 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 ZNF503Q96F45 646 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 SLC50A1Q9BRV3 221 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 CLEC5AQ9NY25 188 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 SELENOKQ9Y6D0 94 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 HERC2O95714 4834 aa9.05□□□□□ -0.96
CCDC84-209ENST00000580556 IGKV3-7A0A075B6H7 116 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 TRBV19A0A075B6N1 114 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 H3BQ15 152 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 CXorf1O96002 111 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 ARL14EPLP0DKL9 152 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 PYYP10082 97 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 ID1P41134 155 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 FHITP49789 147 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
CCDC84-209ENST00000580556 SSX7Q7RTT5 188 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 GBGT1Q8N5D6 347 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 FAM213BQ8TBF2 198 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 RNF141Q8WVD5 230 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 MBD3L1Q8WWY6 194 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 SAT2Q96F10 170 aaPredicted RBP9.04□□□□□ -0.96
CCDC84-209ENST00000580556 PRR25Q96S07 402 aa9.04□□□□□ -0.96
CCDC84-209ENST00000580556 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 MAP1LC3B2A6NCE7 125 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 NBEAP1P0C6P0 100 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 TFPI2P48307 235 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 ODF3L2Q3SX64 289 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 TEX261Q6UWH6 196 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 ALKAL2Q6UX46 152 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 MAP1LC3BQ9GZQ8 125 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 ZNF331Q9NQX6 463 aaPredicted RBP9.03□□□□□ -0.96
CCDC84-209ENST00000580556 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 ZNF586Q9NXT0 402 aa9.03□□□□□ -0.96
CCDC84-209ENST00000580556 TRAV8-2A0A0B4J237 113 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 HMGB3O15347 200 aaKnown RBP9.02□□□□□ -0.97
CCDC84-209ENST00000580556 OR10J4P0C629 311 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 GCHFRP30047 84 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 CD81P60033 236 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 PSG9Q00887 426 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 ZFAND6Q6FIF0 208 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 LYPD1Q8N2G4 141 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 C16orf92Q96LL3 132 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 MAP6D1Q9H9H5 199 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 C19orf73Q9NVV2 129 aa9.02□□□□□ -0.97
CCDC84-209ENST00000580556 OR11H12B2RN74 326 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 TEX46H3BTG2 121 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 SLC17A3O00476 420 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 EIF3GO75821 320 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCDC84-209ENST00000580556 NDUFB4O95168 129 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 IFNA7P01567 189 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 CD7P09564 240 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 H2AFB1P0C5Y9 115 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 FAM74A1Q5RGS3 127 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 WFDC3Q8IUB2 231 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 Q8N1Y9 231 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 FAM24BQ8N5W8 94 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 ZNF680Q8NEM1 530 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 LRRC20Q8TCA0 184 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 SFT2D1Q8WV19 159 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 MRPL53Q96EL3 112 aaKnown RBP9.01□□□□□ -0.97
CCDC84-209ENST00000580556 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
CCDC84-209ENST00000580556 ZNF705EA8MWA4 302 aaPredicted RBP9□□□□□ -0.97
CCDC84-209ENST00000580556 HBE1P02100 147 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms