RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TRAV8-2A0A0B4J237 113 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 KNCNA6PVL3 124 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 CFDP00746 253 aaPredicted RBP6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 RPL35AP18077 110 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 HBG1P69891 147 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 HBG2P69892 147 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 ATP6V1FQ16864 119 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 C1orf194Q5T5A4 169 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 GDF5OSQ5U4N7 250 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 SPATA31B1PQ5VZV4 182 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 PPP1R14BQ96C90 147 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 NARS2Q96I59 477 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 RSG1Q9BU20 258 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 WDR61Q9GZS3 305 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 SLC39A9Q9NUM3 307 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
NPLOC4-219ENST00000576713 HELTA6NFD8 242 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 H3BTX0 84 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 CD5P06127 495 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 GIG44P09565 113 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 NHLRC4P0CG21 123 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 HLA-DMBP28068 263 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 BMI1P35226 326 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 RPL29P47914 159 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 PSMG4Q5JS54 123 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 LINC00305Q7Z4B0 112 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 OR8I2Q8N0Y5 310 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 OR2T35Q8NGX2 323 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 ATP5SQ99766 215 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 FBXL17Q9UF56 701 aa6.94□□□□□ -1.3
NPLOC4-219ENST00000576713 RYR3Q15413 4870 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 LOC102724200A0A096LPH7 203 aaPredicted RBP6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 F6UB75 175 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 H3BQ15 152 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 SLC17A3O00476 420 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 COX7A2P2O60397 106 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 PET100P0DJ07 73 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 B2MP61769 119 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 Q6ZNX1 250 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 TRPT1Q86TN4 253 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 RNF182Q8N6D2 247 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 OR11H4Q8NGC9 324 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 RCHY1Q96PM5 261 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 AQP10Q96PS8 301 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 SEPSECSQ9HD40 501 aaKnown RBP6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 TNFSF18Q9UNG2 199 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 U3KQK5 164 aa6.93□□□□□ -1.3
NPLOC4-219ENST00000576713 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 FXYD6-FXYD2A0A087WZ82 144 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 C4BPBP20851 252 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 NUP62P37198 522 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 AP2S1P53680 142 aaPredicted RBP6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 ACTL10Q5JWF8 245 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 C10orf113Q5VZT2 155 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 FAM167A-AS1Q96KT0 104 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 OVOL2Q9BRP0 275 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 DNAJC4Q9NNZ3 241 aa6.92□□□□□ -1.3
NPLOC4-219ENST00000576713 A0A087X0K7 114 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 A0A1B0GVG6 124 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 MPDU1O75352 247 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 ZNF705DP0CH99 300 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 ZNF705BP0CI00 300 aaPredicted RBP6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 PYYP10082 97 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 PXDC1Q5TGL8 231 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 MIR17HGQ75NE6 70 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 ASB13Q8WXK3 278 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 LINC00052Q96N35 136 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 SLC25A2Q9BXI2 301 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 SH3BGRL3Q9H299 93 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 LYSTQ99698 3801 aa6.91□□□□□ -1.3
NPLOC4-219ENST00000576713 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 H3BMM0 161 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 IGKV3-20P01619 116 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 GALR1P47211 349 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 PSMB3P49720 205 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 CD300CQ08708 224 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 FGL1Q08830 312 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 RAB31Q13636 194 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 RPL7L1Q6DKI1 246 aaKnown RBP6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 Q6ZRG5 221 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 SAT2Q96F10 170 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 ST6GAL2Q96JF0 529 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 PARD6GQ9BYG4 376 aaPredicted RBP6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 EDA2RQ9HAV5 297 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 CYTL1Q9NRR1 136 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
NPLOC4-219ENST00000576713 KIR2DL5BA0A0G2JN68 375 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 KIR2DL5BA0A0G2JPC4 375 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 F5H697 171 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 ISLRO14498 428 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 ARPC5O15511 151 aa6.89□□□□□ -1.31
NPLOC4-219ENST00000576713 NDUFB4O95168 129 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms