RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 H3BQ15 152 aa18.24■□□□□ 0.51
ATPAF1-213ENST00000574428 OVOL1O14753 267 aa18.24■□□□□ 0.51
ATPAF1-213ENST00000574428 FOLR2P14207 255 aa18.24■□□□□ 0.51
ATPAF1-213ENST00000574428 SOHLH1Q5JUK2 328 aa18.24■□□□□ 0.51
ATPAF1-213ENST00000574428 ADAMTSL5Q6ZMM2 481 aa18.24■□□□□ 0.51
ATPAF1-213ENST00000574428 SMAD5-AS1Q9Y6J3 95 aa18.24■□□□□ 0.51
ATPAF1-213ENST00000574428 FAM74A7A6NL05 159 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 DNASE2O00115 360 aaPredicted RBP18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 IGLC2P0DOY2 106 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 PSMB3P49720 205 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 UBE2G2P60604 165 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 FAM74A3Q4VXF1 159 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 OR4F17Q8NGA8 305 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 BLNKQ8WV28 456 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 OR4F4Q96R69 305 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 TMEM167BQ9NRX6 74 aa18.23■□□□□ 0.51
ATPAF1-213ENST00000574428 CEBPGP53567 150 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 MANBALQ9NQG1 85 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 ZNF586Q9NXT0 402 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 CSN3P07498 182 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 SIGLEC15Q6ZMC9 328 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 SUN5Q8TC36 379 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 C17orf77Q96MU5 243 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 GPR82Q96P67 336 aa18.22■□□□□ 0.51
ATPAF1-213ENST00000574428 WNK1Q9H4A3 2382 aa18.21■□□□□ 0.51
ATPAF1-213ENST00000574428 NBEAP1P0C6P0 100 aa18.21■□□□□ 0.51
ATPAF1-213ENST00000574428 HIST1H1EP10412 219 aaKnown RBP18.21■□□□□ 0.51
ATPAF1-213ENST00000574428 GALR1P47211 349 aa18.21■□□□□ 0.51
ATPAF1-213ENST00000574428 MLXQ9UH92 298 aa18.21■□□□□ 0.51
ATPAF1-213ENST00000574428 ATF4P18848 351 aaPredicted RBP18.2■□□□□ 0.5
ATPAF1-213ENST00000574428 BMI1P35226 326 aa18.2■□□□□ 0.5
ATPAF1-213ENST00000574428 TMA7Q9Y2S6 64 aaKnown RBP18.2■□□□□ 0.5
ATPAF1-213ENST00000574428 YTHDF2Q9Y5A9 579 aaKnown RBP18.2■□□□□ 0.5
ATPAF1-213ENST00000574428 COL6A5A8TX70 2615 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 M0QZ24 198 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 PAGE4O60829 102 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 MEF2BQ02080 365 aaPredicted RBP18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 LINC00482Q8N8I6 264 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 ZNF785A8K8V0 405 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 TAGLN2P37802 199 aaKnown RBP18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 CD81P60033 236 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 RPL11P62913 178 aaKnown RBP18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 SHISA2Q6UWI4 295 aa18.19■□□□□ 0.5
ATPAF1-213ENST00000574428 STAB1Q9NY15 2570 aa18.18■□□□□ 0.5
ATPAF1-213ENST00000574428 TRBV19A0A075B6N1 114 aa18.18■□□□□ 0.5
ATPAF1-213ENST00000574428 FAM90A2PQ658T7 463 aa18.18■□□□□ 0.5
ATPAF1-213ENST00000574428 TCF24Q7RTU0 167 aa18.18■□□□□ 0.5
ATPAF1-213ENST00000574428 IGKV3-7A0A075B6H7 116 aa18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 SLC17A3O00476 420 aa18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 TMEM88Q6PEY1 159 aa18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 HELTA6NFD8 242 aa18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 RANP62826 216 aaKnown RBP18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 CST9LP1Q5W188 147 aa18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 CBLN2Q8IUK8 224 aa18.17■□□□□ 0.5
ATPAF1-213ENST00000574428 A0A087X0K7 114 aa18.16■□□□□ 0.5
ATPAF1-213ENST00000574428 M0R036 132 aa18.16■□□□□ 0.5
ATPAF1-213ENST00000574428 NDUFB4O95168 129 aa18.16■□□□□ 0.5
ATPAF1-213ENST00000574428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.16■□□□□ 0.5
ATPAF1-213ENST00000574428 DYNLRB2Q8TF09 96 aa18.16■□□□□ 0.5
ATPAF1-213ENST00000574428 ATP5G3P48201 142 aa18.15■□□□□ 0.5
ATPAF1-213ENST00000574428 SPATA3Q8NHX4 192 aa18.15■□□□□ 0.5
ATPAF1-213ENST00000574428 VWFP04275 2813 aa18.15■□□□□ 0.5
ATPAF1-213ENST00000574428 MDFIQ99750 246 aa18.14■□□□□ 0.5
ATPAF1-213ENST00000574428 GGTLC3B5MD39 225 aa18.14■□□□□ 0.49
ATPAF1-213ENST00000574428 A0A1W2PRE2 83 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 C7orf77A4D0Y5 90 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 C11orf94C9JXX5 98 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 SAP30O75446 220 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 AKR1C3P42330 323 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 EXOC3-AS1Q8N2X6 119 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 GBGT1Q8N5D6 347 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 Q9H3A6 140 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 RPS10P5Q9NQ39 176 aa18.13■□□□□ 0.49
ATPAF1-213ENST00000574428 NDUFS6O75380 124 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 PDE6HQ13956 83 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 IGFL4Q6B9Z1 124 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 NIPSNAP3BQ9BS92 247 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 NRN1Q9NPD7 142 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 SIGLEC8Q9NYZ4 499 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 ARL2-SNX15V9GYD0 113 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 RHEBQ15382 184 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 DEFB114Q30KQ6 69 aa18.12■□□□□ 0.49
ATPAF1-213ENST00000574428 TMEM250H0YL14 139 aa18.11■□□□□ 0.49
ATPAF1-213ENST00000574428 SUMO1P63165 101 aaKnown RBP18.11■□□□□ 0.49
ATPAF1-213ENST00000574428 TSPAN4O14817 238 aa18.1■□□□□ 0.49
ATPAF1-213ENST00000574428 CD300EQ496F6 205 aaPredicted RBP18.1■□□□□ 0.49
ATPAF1-213ENST00000574428 TMEM61Q8N0U2 210 aa18.1■□□□□ 0.49
ATPAF1-213ENST00000574428 TVP23CQ96ET8 276 aa18.1■□□□□ 0.49
ATPAF1-213ENST00000574428 MS4A6AQ9H2W1 248 aa18.1■□□□□ 0.49
ATPAF1-213ENST00000574428 ZNF331Q9NQX6 463 aaPredicted RBP18.1■□□□□ 0.49
ATPAF1-213ENST00000574428 PGPA6NDG6 321 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 TFPI2P48307 235 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 MEOX2P50222 304 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 ZNF253O75346 499 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 HLA-DMBP28068 263 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 PSG9Q00887 426 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 WFDC3Q8IUB2 231 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 OTORQ9NRC9 128 aa18.09■□□□□ 0.49
ATPAF1-213ENST00000574428 TRAV8-2A0A0B4J237 113 aa18.08■□□□□ 0.48
ATPAF1-213ENST00000574428 ZNF727A8MUV8 499 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms