RNA–Protein interactions for RNA: ENST00000570063.5

RSRP1-222, Transcript of arginine and serine rich protein 1, human

TSL 5

Gene RSRP1, Length 1,821 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSRP1-222	ENST00000570063	CIART	Q8N365	385 aa	Predicted RBP	13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	PACRG	Q96M98	296 aa	Predicted RBP	13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	ATP6V0B	Q99437	205 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	RPP21	Q9H633	154 aa	Known RBP	13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	NIT2	Q9NQR4	276 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	FAM223B	A6NKX1	122 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	MT-ND6	P03923	174 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	RPL19	P84098	196 aa	Known RBP	13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	ATP5G2	Q06055	141 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	PSG3	Q16557	428 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	CT83	Q5H943	113 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	C16orf54	Q6UWD8	224 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	FAM223A	Q8IWN6	122 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	WIPF2	Q8TF74	440 aa	Predicted RBP	13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	NEU1	Q99519	415 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	TP53TG3	Q9ULZ0	132 aa		13.78	□□□□□ -0.2
RSRP1-222	ENST00000570063	BRI3	O95415	125 aa		13.77	□□□□□ -0.21
RSRP1-222	ENST00000570063	COL8A1	P27658	744 aa		13.77	□□□□□ -0.21
RSRP1-222	ENST00000570063	PPIF	P30405	207 aa	Known RBP	13.77	□□□□□ -0.21
RSRP1-222	ENST00000570063	C9orf152	Q5JTZ5	239 aa		13.77	□□□□□ -0.21
RSRP1-222	ENST00000570063	PSG8	Q9UQ74	426 aa		13.77	□□□□□ -0.21
RSRP1-222	ENST00000570063		M0QZK8	103 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	ZNF253	O75346	499 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	IGHG4	P01861	327 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	PRB4	P10163	310 aa	Predicted RBP	13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	PSG9	Q00887	426 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	TMEM256	Q8N2U0	113 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	GBGT1	Q8N5D6	347 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	ARL6IP6	Q8N6S5	226 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	NAT8B	Q9UHF3	227 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	ZFP30	Q9Y2G7	519 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	SPG11	Q96JI7	2443 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	CSMD2	Q7Z408	3487 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	GRIFIN	A4D1Z8	144 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	BUB3	O43684	328 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	NUPR1	O60356	82 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	LINC00310	P59036	64 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	GDF5OS	Q5U4N7	250 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	CDPF1	Q6NVV7	123 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	RASL11A	Q6T310	242 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063		Q6ZS46	218 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063	AAMDC	Q9H7C9	122 aa		13.76	□□□□□ -0.21
RSRP1-222	ENST00000570063		A0A087X0K7	114 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	HIGD1C	A8MV81	97 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063		J3QLI3	93 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063		P01737	135 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	S100A7	P31151	101 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	BLCAP	P62952	87 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	LOXL1	Q08397	574 aa	Predicted RBP	13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	GTSF1	Q8WW33	167 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	ZC2HC1A	Q96GY0	325 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	NOL4L	Q96MY1	436 aa	Predicted RBP	13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063	GNB4	Q9HAV0	340 aa		13.75	□□□□□ -0.21
RSRP1-222	ENST00000570063		A0A1B0GXF2	115 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063		K7EQM0	130 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	HLA-DQA1	P01909	254 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	TRGV3	P03979	118 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	MAPK1IP1L	Q8NDC0	245 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	ASCL2	Q99929	193 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063		U3KQE9	123 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	SERTM2	A0A1B0GWG4	89 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063		A8MWL6	223 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063		H3BUA1	57 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	CRISP2	P16562	243 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063		Q0VG73	95 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	TCF24	Q7RTU0	167 aa		13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.74	□□□□□ -0.21
RSRP1-222	ENST00000570063	CRIP1	P50238	77 aa		13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	RAB9A	P51151	201 aa		13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	REL	Q04864	619 aa	Predicted RBP	13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	DEFB112	Q30KQ8	113 aa		13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	OR4B1	Q8NGF8	309 aa		13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	GFRA4	Q9GZZ7	299 aa		13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	BEX4	Q9NWD9	120 aa	Predicted RBP	13.73	□□□□□ -0.21
RSRP1-222	ENST00000570063	RNF223	E7ERA6	249 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	APOH	P02749	345 aa	Predicted RBP	13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	ESD	P10768	282 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	HLA-DMB	P28068	263 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	S100A12	P80511	92 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	C1orf194	Q5T5A4	169 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	ATP5L2	Q7Z4Y8	100 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	DAZAP1	Q96EP5	407 aa	Known RBP	13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	GSN-AS1	Q9NRJ2	163 aa		13.72	□□□□□ -0.21
RSRP1-222	ENST00000570063	FSHB	P01225	129 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	CSN1S1	P47710	185 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	TPPP2	P59282	170 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	CFHR3	Q02985	330 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	DEFB113	Q30KQ7	82 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	KIAA1644	Q3SXP7	199 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	DNLZ	Q5SXM8	178 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	TMEM18	Q96B42	140 aa		13.71	□□□□□ -0.21
RSRP1-222	ENST00000570063	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.71	□□□□□ -0.22	6e-12	■■■■■ 30.4
RSRP1-222	ENST00000570063	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.71	□□□□□ -0.22
RSRP1-222	ENST00000570063	FAM231B	A6NCW3	169 aa		13.71	□□□□□ -0.22
RSRP1-222	ENST00000570063		F2Z2F3	143 aa		13.71	□□□□□ -0.22
RSRP1-222	ENST00000570063	CHEK1	O14757	476 aa		13.71	□□□□□ -0.22
RSRP1-222	ENST00000570063	TGFA	P01135	160 aa		13.71	□□□□□ -0.22
RSRP1-222	ENST00000570063	IGKV2D-40	P01614	121 aa	Predicted RBP	13.71	□□□□□ -0.22
RSRP1-222	ENST00000570063	IGHV4-31	P0DP07	118 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms