RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 RGPD1P0DJD0 1748 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV1OR15-1A0A075B7D0 117 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGLV5-45A0A087WSX0 123 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 GRIFINA4D1Z8 144 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 BCE1O60756 84 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 TCL1BO95988 128 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 LTAP01374 205 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV3-7P01780 117 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV3-43DP0DP04 118 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV4-38-2P0DP08 117 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 CXCL8P10145 99 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 ELK1P19419 428 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 HIST1H4AP62805 103 aaKnown RBP3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 WFDC2Q14508 124 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGFBP7Q16270 282 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 LPAL2Q16609 132 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF876PQ49A33 203 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 C7orf65Q6ZTY9 151 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 CEND1Q8N111 149 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 CD177Q8N6Q3 437 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 POM121L12Q8N7R1 296 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 FAM213BQ8TBF2 198 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 LSM10Q969L4 123 aaKnown RBP3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 TMEM243Q9BU79 118 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 TAC3Q9UHF0 121 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 PRO0461Q9UI25 63 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF835Q9Y2P0 537 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 LY96Q9Y6Y9 160 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 RGPD8O14715 1765 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 LAMB1P07942 1786 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 RGPD5Q99666 1765 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 FER1L5A0AVI2 2057 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 ATG2BQ96BY7 2078 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 NESP48681 1621 aa3.37□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF142P52746 1687 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 RGPD3A6NKT7 1758 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 GPATCH8Q9UKJ3 1502 aaKnown RBP3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 DOCK2Q92608 1830 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 TRBV6-7A0A0A0MS04 114 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV1-45A0A0A0MS14 117 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 TRAV2A0A0B4J234 112 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 A0A0D9SEW6 157 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 C9JCJ5 164 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGKV1-5P01602 117 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 C1QAP02745 245 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 PRM2P04554 102 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 UBE2AP49459 152 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF138P52744 262 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 CRIP2P52943 208 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 MPV17LQ2QL34 196 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 ODF3L2Q3SX64 289 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 GUSBP11Q6P575 273 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 TOMM5Q8N4H5 51 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 SERP2Q8N6R1 65 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF491Q8N8L2 437 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 Q8N976 141 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 LINC01555Q8NAE3 123 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 C9orf106Q8NAJ2 232 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 FLVCR1-AS1Q8TAF5 88 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 DIRC1Q969H9 104 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 AMELYQ99218 206 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 SLC25A2Q9BXI2 301 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 LINC00597Q9H2U6 94 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 XAGE1AQ9HD64 81 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 CYTL1Q9NRR1 136 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 TAS2R4Q9NYW5 299 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 MAST1Q9Y2H9 1570 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 EML6Q6ZMW3 1958 aa3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 XRN1Q8IZH2 1706 aaKnown RBP3.36□□□□□ -1.87
HMGB3P26-201ENST00000560051 KIDINS220Q9ULH0 1771 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 DOCK1Q14185 1865 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 CEP170Q5SW79 1584 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 LAMC3Q9Y6N6 1575 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 EIF2AK4Q9P2K8 1649 aaKnown RBP3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 TRAV17A0A0B4J275 112 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 K7EQD1 137 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 M0R129 80 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF324O75467 553 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 IGHV1-2P23083 117 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 CFAP126Q5VTH2 177 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 ATP11AUNQ6ZP68 121 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 SPATA12Q7Z6I5 190 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 PRNTQ86SH4 94 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 GPHB5Q86YW7 130 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 Q8N2B8 174 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 Q8N9P0 234 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 STAG3L4Q8TBR4 150 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 SPTSSAQ969W0 71 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF714Q96N38 554 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 CHCHD5Q9BSY4 110 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 SCRT1Q9BWW7 348 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 CST11Q9H112 138 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 ZNF492Q9P255 531 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 DPM3Q9P2X0 92 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 LINC00588Q9Y4M8 146 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 MROH2AA6NES4 1674 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 RGPD2P0DJD1 1756 aa3.35□□□□□ -1.87
HMGB3P26-201ENST00000560051 COL3A1P02461 1466 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms