RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 FAM240BA0A1B0GVZ2 78 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 M0R2Z0 102 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 INSP01308 110 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 CAV2P51636 162 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 MORN5Q5VZ52 161 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 LCN15Q6UWW0 184 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 TMEM37Q8WXS4 190 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 ZNF331Q9NQX6 463 aaPredicted RBP12.12□□□□□ -0.47
LRRC28-210ENST00000558879 WDR83OSQ9Y284 106 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
LRRC28-210ENST00000558879 DNAH10Q8IVF4 4471 aa12.12□□□□□ -0.47
LRRC28-210ENST00000558879 FAM24AA6NFZ4 105 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 EMP1P54849 157 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 RAB32Q13637 225 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 OXA1LQ15070 435 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 PSG3Q16557 428 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 MZT2BQ6NZ67 158 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
LRRC28-210ENST00000558879 IGSF23A1L1A6 192 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 COX7A2P2O60397 106 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 CST7O76096 145 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 PVALBP20472 110 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-210ENST00000558879 CAMLGP49069 296 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 SULT1A1P50225 295 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 BCAP31P51572 246 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 OPCMLQ14982 345 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 BPIFA4PQ86YQ2 179 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
LRRC28-210ENST00000558879 A6NHS1 94 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 S100A10P60903 97 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 HIST1H1AQ02539 215 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-210ENST00000558879 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 FAM210BQ96KR6 192 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 UQCC1Q9NVA1 299 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 HECTD4Q9Y4D8 3996 aa12.09□□□□□ -0.47
LRRC28-210ENST00000558879 UBE2L5PA0A1B0GUS4 154 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 PLAC8L1A1L4L8 177 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 SLC17A3O00476 420 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 UPK1BO75841 260 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 TSPOP30536 169 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 B2MP61769 119 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 TMEM208Q9BTX3 173 aa12.08□□□□□ -0.48
LRRC28-210ENST00000558879 TRAV12-2A0A075B6T6 113 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 P0DMU3 169 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 FAM231AP0DMU4 169 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 FAM231CP0DMU5 169 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 S100A11P31949 105 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 RPL29P47914 159 aaKnown RBP12.07□□□□□ -0.48
LRRC28-210ENST00000558879 IFITM3Q01628 133 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 RAB31Q13636 194 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 STX12Q86Y82 276 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 LRRC20Q8TCA0 184 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 RPUSD4Q96CM3 377 aaKnown RBP12.07□□□□□ -0.48
LRRC28-210ENST00000558879 SAT2Q96F10 170 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-210ENST00000558879 PFDN5Q99471 154 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 PTTG2Q9NZH5 202 aa12.07□□□□□ -0.48
LRRC28-210ENST00000558879 PRM2P04554 102 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 HBG1P69891 147 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 HBG2P69892 147 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 BAXQ07812 192 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 Q6ZRG5 221 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 TMEM256Q8N2U0 113 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 OR1L4Q8NGR5 311 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 ENKURQ8TC29 256 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 DNAJC4Q9NNZ3 241 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 PLA2G2EQ9NZK7 142 aa12.06□□□□□ -0.48
LRRC28-210ENST00000558879 LYRM9A8MSI8 78 aa12.05□□□□□ -0.48
LRRC28-210ENST00000558879 ZNF705GA8MUZ8 300 aaPredicted RBP12.05□□□□□ -0.48
LRRC28-210ENST00000558879 H3BQ15 152 aa12.05□□□□□ -0.48
LRRC28-210ENST00000558879 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
LRRC28-210ENST00000558879 PRB4P10163 310 aaPredicted RBP12.05□□□□□ -0.48
LRRC28-210ENST00000558879 CDKN1BP46527 198 aa12.05□□□□□ -0.48
LRRC28-210ENST00000558879 RHOBP62745 196 aa12.05□□□□□ -0.48
LRRC28-210ENST00000558879 POM121L12Q8N7R1 296 aa12.05□□□□□ -0.48
LRRC28-210ENST00000558879 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
LRRC28-210ENST00000558879 H3BTX0 84 aa12.04□□□□□ -0.48
LRRC28-210ENST00000558879 MPDU1O75352 247 aa12.04□□□□□ -0.48
LRRC28-210ENST00000558879 DAD1P61803 113 aa12.04□□□□□ -0.48
LRRC28-210ENST00000558879 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
LRRC28-210ENST00000558879 NMES1Q9C002 83 aa12.04□□□□□ -0.48
LRRC28-210ENST00000558879 GPN1Q9HCN4 374 aaPredicted RBP12.04□□□□□ -0.48
LRRC28-210ENST00000558879 TRAV5A0A0B4J249 113 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 PRAC2D3DTV9 90 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 PRAF2O60831 178 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 ZNF253O75346 499 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 AZU1P20160 251 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 FGF7P21781 194 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 GUK1Q16774 197 aa12.03□□□□□ -0.48
LRRC28-210ENST00000558879 C20orf144Q9BQM9 153 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms