RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FAUP35544 74 aaKnown RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 GPX4P36969 197 aaPredicted RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 P2RY1P47900 373 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 INPP1P49441 399 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 SUB1P53999 127 aaKnown RBP eCLIP3.07□□□□□ -1.92
SPG11-211ENST00000558561 AP3S2P59780 193 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 YPEL3P61236 119 aaPredicted RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 IAH1Q2TAA2 248 aaPredicted RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 DEFB135Q30KP9 77 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 CASC10Q5T4H9 136 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 OR8G2PQ6IF36 304 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 SLC16A13Q7RTY0 426 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 C12orf45Q8N5I9 185 aaPredicted RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 OR2K2Q8NGT1 345 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 DCANP1Q8TF63 244 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 Q8WTZ3 238 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 MITD1Q8WV92 249 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 PBDC1Q9BVG4 233 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 SCRT1Q9BWW7 348 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 NUDT15Q9NV35 164 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 PSENENQ9NZ42 101 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 DOK5Q9P104 306 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 ZMAT5Q9UDW3 170 aaKnown RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 RABAC1Q9UI14 185 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 TMED3Q9Y3Q3 217 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 LSM5Q9Y4Y9 91 aaKnown RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 U3KQ87 197 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 HYDINQ4G0P3 5121 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 LOC102724200A0A096LPH7 203 aaPredicted RBP3.06□□□□□ -1.92
SPG11-211ENST00000558561 TRAV8-2A0A0B4J237 113 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 A0A0J9YWU9 116 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 FAM240BA0A1B0GVZ2 78 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 IGSF23A1L1A6 192 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 ZFP92A6NM28 416 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 H3BTX0 84 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 K7EPK0 472 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 DNASE2O00115 360 aaPredicted RBP3.06□□□□□ -1.92
SPG11-211ENST00000558561 UPK1BO75841 260 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 CST7O76096 145 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 LINC00869P0C866 280 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 SLC25A6P12236 298 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 ANXA3P12429 323 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 ORM2P19652 201 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 NKX2-1P43699 371 aaPredicted RBP3.06□□□□□ -1.92
SPG11-211ENST00000558561 LYZP61626 148 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 ASAH1Q13510 395 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 KIAA1644Q3SXP7 199 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 ZNF876PQ49A33 203 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 Q5BKY6 102 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 LAMTOR1Q6IAA8 161 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 TMEM14EPQ6UXP3 125 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 GTSCR1Q86UQ5 136 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 MAPKAPK5-AS1Q8N8E1 139 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 THAP8Q8NA92 274 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 STXBP6Q8NFX7 210 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 OR1S2Q8NGQ3 325 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 MUC7Q8TAX7 377 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 RNASEH2CQ8TDP1 164 aaKnown RBP3.06□□□□□ -1.92
SPG11-211ENST00000558561 ZNF431Q8TF32 576 aaPredicted RBP3.06□□□□□ -1.92
SPG11-211ENST00000558561 MARC2Q969Z3 335 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 SMIM8Q96KF7 97 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 RAB40CQ96S21 281 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 ATP6V0BQ99437 205 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 SPAG8Q99932 426 aaPredicted RBP3.06□□□□□ -1.92
SPG11-211ENST00000558561 RNF126Q9BV68 326 aa3.06□□□□□ -1.92
SPG11-211ENST00000558561 TRAV30A0A087WSZ9 112 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 DUXBA0A1W2PPF3 345 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 C5orf51A6NDU8 294 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 ZNF98A6NK75 572 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 CENPXA8MT69 81 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 ZNF705FA8MVS1 300 aaPredicted RBP3.05□□□□□ -1.92
SPG11-211ENST00000558561 SNRPGP15A8MWD9 76 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 INMT-MINDY4F8WBC2 141 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 SOCS3O14543 225 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 CYB5BO43169 146 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 IL5P05113 134 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 RBMY1A1P0DJD3 496 aaKnown RBP3.05□□□□□ -1.92
SPG11-211ENST00000558561 RBMY1CP0DJD4 496 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 SLC25A4P12235 298 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 CXCL3P19876 107 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 C4BPBP20851 252 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 H2BFSP57053 126 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 SLC38A11Q08AI6 406 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 ZNF846Q147U1 533 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 RBMY1FQ15415 496 aaKnown RBP3.05□□□□□ -1.92
SPG11-211ENST00000558561 PSMG4Q5JS54 123 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 ACTL10Q5JWF8 245 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 MIC13Q5XKP0 118 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 ACOT7LQ6ZUV0 252 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 ZNF767PQ75MW2 155 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 RNF182Q8N6D2 247 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 CSNK1G2-AS1Q8NCQ2 148 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 BPIFCQ8NFQ6 507 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 COQ8AQ8NI60 647 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 TMEM37Q8WXS4 190 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 SLC35E1Q96K37 410 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 C2orf50Q96LR7 162 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 LINC00052Q96N35 136 aa3.05□□□□□ -1.92
SPG11-211ENST00000558561 METTL26Q96S19 204 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms