RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LINC00854A0A1B0GVQ3 168 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 TAS2R60P59551 318 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 ZNF846Q147U1 533 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 BAK1Q16611 211 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 Q6ZR54 194 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 ARV1Q9H2C2 271 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 FLVCR2Q9UPI3 526 aa9.63□□□□□ -0.87
SNRPA1-204ENST00000558020 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 CBY3A6NI87 242 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 F5H768 121 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 L7N2F9 121 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 ATP5G1P05496 136 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 HTN1P15515 57 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 CXCL2P19875 107 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 ATP5G3P48201 142 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 VAMP2P63027 116 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 LCN15Q6UWW0 184 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 BPIFA4PQ86YQ2 179 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 BAP18Q8IXM2 172 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 MITD1Q8WV92 249 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 RPUSD4Q96CM3 377 aaKnown RBP9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 SLC50A1Q9BRV3 221 aa9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 TIMM8BQ9Y5J9 83 aaPredicted RBP9.62□□□□□ -0.87
SNRPA1-204ENST00000558020 AGPAT2O15120 278 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 COX7A2P2O60397 106 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 CDKN1BP46527 198 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 SLC38A11Q08AI6 406 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 Q6ZRG5 221 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 ZBTB8BQ8NAP8 495 aaPredicted RBP9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
SNRPA1-204ENST00000558020 C7orf66A4D0T2 115 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 H7BYZ3 331 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 PRM2P04554 102 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 AZU1P20160 251 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 CCL18P55774 89 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 PATE2Q6UY27 113 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 CCDC28AQ8IWP9 274 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 ZNF331Q9NQX6 463 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 NDUFA13Q9P0J0 144 aa9.6□□□□□ -0.87
SNRPA1-204ENST00000558020 CCNKO75909 580 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 NUDT3O95989 172 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 BCAP31P51572 246 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 C10orf113Q5VZT2 155 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 DNAJC4Q9NNZ3 241 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 PXMP4Q9Y6I8 212 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 HERC2O95714 4834 aa9.59□□□□□ -0.87
SNRPA1-204ENST00000558020 IL7P13232 177 aa9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 PVALBP20472 110 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 CLINT1Q14677 625 aa9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 FCN2Q15485 313 aa9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 GUK1Q16774 197 aa9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 TMEM263Q8WUH6 116 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-204ENST00000558020 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 C5orf51A6NDU8 294 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 FAM25EA8MYX2 175 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 CAMLGP49069 296 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 CAV2P51636 162 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 C12orf45Q8N5I9 185 aaPredicted RBP9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 OR1L4Q8NGR5 311 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 PFDN5Q99471 154 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 C20orf85Q9H1P6 137 aa9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 NOP10Q9NPE3 64 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-204ENST00000558020 BTCP35070 178 aa9.56□□□□□ -0.88
SNRPA1-204ENST00000558020 ARL16Q0P5N6 197 aa9.56□□□□□ -0.88
SNRPA1-204ENST00000558020 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
SNRPA1-204ENST00000558020 SDHCQ99643 169 aaPredicted RBP9.56□□□□□ -0.88
SNRPA1-204ENST00000558020 MGST2Q99735 147 aa9.56□□□□□ -0.88
SNRPA1-204ENST00000558020 LSM5Q9Y4Y9 91 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-204ENST00000558020 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 SNURFLB1AK76 121 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 LYRM1O43325 122 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 SNRPCP09234 159 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 S100A11P31949 105 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 LEPP41159 167 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 NRARPQ7Z6K4 114 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 UQCC1Q9NVA1 299 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
SNRPA1-204ENST00000558020 DNAH2Q9P225 4427 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 CST7O76096 145 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 RLN2P04090 185 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 TCRBP04435 133 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 HBG1P69891 147 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 HBG2P69892 147 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 OR5I1Q13606 314 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 OPCMLQ14982 345 aa9.54□□□□□ -0.88
SNRPA1-204ENST00000558020 STX12Q86Y82 276 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms