RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 ORMDL3Q8N138 153 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 LYPD1Q8N2G4 141 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TMEM75Q8N9X5 138 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TMEM167AQ8TBQ9 72 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF502Q8TBZ5 544 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 IGFBPL1Q8WX77 278 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SRSF12Q8WXF0 261 aaKnown RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 FLYWCH2Q96CP2 140 aaKnown RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 MRAP2Q96G30 205 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 PRELID3AQ96N28 172 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 MCRIP2Q9BUT9 160 aaKnown RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 GTSF1LQ9H1H1 148 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 Q9H3A6 140 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 LINC00574Q9H8X3 128 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TMEM14CQ9P0S9 112 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 PILRBQ9UKJ0 227 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 HIGD1AQ9Y241 93 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 HILPDAQ9Y5L2 63 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TSSC4Q9Y5U2 329 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 INSIG2Q9Y5U4 225 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 HLA-DRB4X5D2U9 266 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SNRNP200O75643 2136 aaKnown RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 MYO7AQ13402 2215 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 MYO9BQ13459 2157 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 ATG2BQ96BY7 2078 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PCNX3Q9H6A9 2034 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGKV1D-17A0A075B6S4 117 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGKV1D-37A0A075B6S9 117 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PPIAL4EA0A075B759 164 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGHV3OR15-7A0A075B7D8 119 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 TEX48A0A1B0GUV7 120 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 A0A1W2PRD5 423 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 A0A1W2PRF3 423 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 A0A1W2PRM7 423 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 MBD3L5A6NJ08 208 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PRSS47A8MTI9 375 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGLL5B9A064 214 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 E9PLD3 99 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 K7EM74 188 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 SLC25A17O43808 307 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 NDUFS7O75251 213 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 LYZL6O75951 148 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 LHBP01229 141 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGKV3-15P01624 115 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGHV3-13P01766 116 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IGKCP01834 107 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 TFF1P04155 84 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 CRYGCP07315 174 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PRSS1P07477 247 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 ARMS2P0C7Q2 107 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PPIAL4FP0DN26 164 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 GP9P14770 177 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 EVI2AP22794 236 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 ACP1P24666 158 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 CD24P25063 80 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 FCER1GP30273 86 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 MC5RP33032 325 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 IFI27P40305 119 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 CXCL12P48061 93 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 NMUP48645 174 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 CACNG7P62955 275 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 MEF2CQ06413 473 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 FAM104BQ5XKR9 115 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PVRIGQ6DKI7 326 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 Q6ZT83 130 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF833PQ6ZTB9 187 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 C18orf65Q6ZTR6 163 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 GOLT1AQ6ZVE7 132 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 Q86TA4 180 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 CIARTQ8N365 385 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 OR4C13Q8NGP0 309 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 ATP6V0E2Q8NHE4 81 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 LEAP2Q969E1 77 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 SGK494Q96LW2 274 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 FER1L6-AS2Q96M78 137 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 HARBI1Q96MB7 349 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 SLC25A39Q9BZJ4 359 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 DEFB127Q9H1M4 99 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 MAP1LC3AQ9H492 121 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 SPANXB1Q9NS25 103 aaPredicted RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 TP73-AS1Q9UF72 201 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 RPUSD1Q9UJJ7 312 aaKnown RBP2.26□□□□□ -2.05
SLIRP-208ENST00000556956 FZR1Q9UM11 496 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PSG8Q9UQ74 426 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 CYSLTR1Q9Y271 337 aa2.26□□□□□ -2.05
SLIRP-208ENST00000556956 PHF3Q92576 2039 aaKnown RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 ADAMTS9Q9P2N4 1935 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LINC01546A6NGU7 62 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 OR11H12B2RN74 326 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 D6R8Y8 96 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 LINC01619G3V211 115 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.25□□□□□ -2.05
SLIRP-208ENST00000556956 SPRY3O43610 288 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 DPM2O94777 84 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 IGLV1-44P01699 117 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 PRSS2P07478 247 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 CECR9P0C854 216 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 COL8A2P25067 703 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 MT3P25713 68 aa2.25□□□□□ -2.05
SLIRP-208ENST00000556956 FCGR2BP31994 310 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms