RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 MRPS15P82914 257 aaKnown RBP1.59□□□□□ -2.15
SCFD1-219ENST00000556413 FABP5Q01469 135 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 WT1-ASQ06250 92 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 C12orf74Q32Q52 190 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 C5orf47Q569G3 176 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 AADACL3Q5VUY0 350 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 GLT8D1Q68CQ7 371 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF773Q6PK81 442 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM91Q6ZNR0 172 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 TCF24Q7RTU0 167 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 PCP2Q8IVA1 136 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 PUSL1Q8N0Z8 303 aaKnown RBP1.59□□□□□ -2.15
SCFD1-219ENST00000556413 NECAP1Q8NC96 275 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF555Q8NEP9 628 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 OR4A4PQ8NGN8 299 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 SLC25A46Q96AG3 418 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 FAM3DQ96BQ1 224 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 OR2A7Q96R45 310 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 RHPN1-AS1Q9BWJ2 59 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 MS4A6AQ9H2W1 248 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 XCL2Q9UBD3 114 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF257Q9Y2Q1 563 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 RBMX2Q9Y388 322 aaKnown RBP1.59□□□□□ -2.15
SCFD1-219ENST00000556413 DNAH8Q96JB1 4490 aa1.59□□□□□ -2.16
SCFD1-219ENST00000556413 TRAV10A0A0B4J240 114 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 IGHV7-4-1A0A0J9YVY3 117 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 TEX50A0A1B0GTY4 177 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 PLAC8L1A1L4L8 177 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 EFCAB10A6NFE3 127 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 OR4C46A6NHA9 309 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 SNTNA6NMZ2 147 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 F6UB75 175 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 K7EIM0 57 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 DNASE2O00115 360 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 LGALS9O00182 355 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 MT-CO2P00403 227 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 IFNA10P01566 189 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 SMR3BP02814 79 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 UCHL1P09936 223 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF735P0CB33 412 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 C8orf88P0DMB2 117 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 MXD1Q05195 221 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 MRPL28Q13084 256 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 RCN1Q15293 331 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 SSX1Q16384 188 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 CCDC58Q4VC31 144 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 PSMG4Q5JS54 123 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 LY6G6FQ5SQ64 297 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 GDF5OSQ5U4N7 250 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 UBE2UQ5VVX9 321 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 C22orf42Q6IC83 251 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF818PQ6ZRF7 136 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 SPATA12Q7Z6I5 190 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 GPHB5Q86YW7 130 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 ARRDC1Q8N5I2 433 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 OR5H6Q8NGV6 325 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 OR10R2Q8NGX6 335 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 OR4S2Q8NH73 311 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 TMEM167AQ8TBQ9 72 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 LGALS14Q8TCE9 139 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 UFD1Q92890 307 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 PTX4Q96A99 478 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 GALNT14Q96FL9 552 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 Q96MT0 163 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 UQCC2Q9BRT2 126 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 C9orf16Q9BUW7 83 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF436Q9C0F3 470 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 CCDC90BQ9GZT6 254 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 FXYD6Q9H0Q3 95 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 ATG5Q9H1Y0 275 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 OR51E2Q9H255 320 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 C11orf68Q9H3H3 251 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 RBKSQ9H477 322 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 DAZ1Q9NQZ3 744 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 SLC2A9Q9NRM0 540 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 C21orf62Q9NYP8 219 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 RPH3ALQ9UNE2 315 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 TP53TG1Q9Y2A0 90 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 MRPS7Q9Y2R9 242 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 LSM2Q9Y333 95 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 PRELID3BQ9Y3B1 194 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 UFC1Q9Y3C8 167 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 YTHDF2Q9Y5A9 579 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 OR51B2Q9Y5P1 312 aa1.58□□□□□ -2.16
SCFD1-219ENST00000556413 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
SCFD1-219ENST00000556413 UPK2O00526 184 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 ITGB1BP1O14713 200 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 B3GALNT1O75752 331 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 ATP5LO75964 103 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 KRASP01116 189 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 HLA-DQB1P01920 261 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 PMP2P02689 132 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 CDK1P06493 297 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 CRYGCP07315 174 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 CTSGP08311 255 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 UBBP0CG47 229 aa1.57□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF705DP0CH99 300 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF705BP0CI00 300 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 RNASE2P10153 161 aaKnown RBP1.57□□□□□ -2.16
SCFD1-219ENST00000556413 CD36P16671 472 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms