RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TMEM136Q6ZRR5 245 aa13.57□□□□□ -0.24
SHOX-204ENST00000554971 Q6ZS46 218 aa13.57□□□□□ -0.24
SHOX-204ENST00000554971 BLCAPP62952 87 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 C5orf17Q8NAS9 161 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 C1RLQ9NZP8 487 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 UBE2G1P62253 170 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 S100A7AQ86SG5 101 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 NPBQ8NG41 125 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 FMC1Q96HJ9 113 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 GPR82Q96P67 336 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 ATG101Q9BSB4 218 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 SERTAD4Q9NUC0 356 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 HIGD1AQ9Y241 93 aa13.56□□□□□ -0.24
SHOX-204ENST00000554971 SH2D7A6NKC9 451 aaPredicted RBP13.55□□□□□ -0.24
SHOX-204ENST00000554971 A8MWP6 167 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 I3L2K1 104 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 IGHV3-48P01763 117 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 RD3LP0DJH9 198 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 BAGE3Q86Y29 109 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 ZNF664Q8N3J9 261 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 FBXL15Q9H469 300 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 ZNF331Q9NQX6 463 aaPredicted RBP13.55□□□□□ -0.24
SHOX-204ENST00000554971 PKD1L1Q8TDX9 2849 aa13.55□□□□□ -0.24
SHOX-204ENST00000554971 SLC25A5P05141 298 aaKnown RBP13.54□□□□□ -0.24
SHOX-204ENST00000554971 IGLC1P0CG04 106 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 GP9P14770 177 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 Q6ZSV7 163 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 ATP5L2Q7Z4Y8 100 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 C5orf56Q8N8D9 126 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 C14orf144Q96I85 54 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 TP53TG3Q9ULZ0 132 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 PGPA6NDG6 321 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 NDUFA3O95167 84 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 TOMM40O96008 361 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 FXYD3Q14802 87 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 PLGLAQ15195 96 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 USF2Q15853 346 aaPredicted RBP13.54□□□□□ -0.24
SHOX-204ENST00000554971 CT83Q5H943 113 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 Q8N9W7 124 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 TMEM68Q96MH6 324 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 NAGKQ9UJ70 344 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 MOB4Q9Y3A3 225 aa13.54□□□□□ -0.24
SHOX-204ENST00000554971 NBR2O15453 112 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 MMDQ15546 238 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 NUDT10Q8NFP7 164 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 TSKUQ8WUA8 353 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 NUDT11Q96G61 164 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 RASL11BQ9BPW5 248 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 WNT10AQ9GZT5 417 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 OTORQ9NRC9 128 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 ZNF492Q9P255 531 aa13.53□□□□□ -0.24
SHOX-204ENST00000554971 TRBV6-1A0A0K0K1D8 114 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 GRIFINA4D1Z8 144 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 NCBP2LA6PVI3 153 aaKnown RBP13.52□□□□□ -0.24
SHOX-204ENST00000554971 NUPR1O60356 82 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 SERF1AO75920 110 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 SCGB1D1O95968 90 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 LINC00479Q96M42 142 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 MLST8Q9BVC4 326 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 PRO1933Q9H354 126 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 ZNF702PQ9H963 129 aa13.52□□□□□ -0.24
SHOX-204ENST00000554971 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.24
SHOX-204ENST00000554971 ZMAT5Q9UDW3 170 aaKnown RBP13.52□□□□□ -0.24
SHOX-204ENST00000554971 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.25
SHOX-204ENST00000554971 CNIH1O95406 144 aa13.52□□□□□ -0.25
SHOX-204ENST00000554971 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
SHOX-204ENST00000554971 MDFIQ99750 246 aa13.52□□□□□ -0.25
SHOX-204ENST00000554971 NDUFAF3Q9BU61 184 aa13.52□□□□□ -0.25
SHOX-204ENST00000554971 APCSP02743 223 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 PSG1P11464 419 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 CMYA5Q8N3K9 4069 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 FAM231BA6NCW3 169 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 LTAP01374 205 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 LINC00310P59036 64 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 TMEM95Q3KNT9 176 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 ZNF600Q6ZNG1 722 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 LYPD1Q8N2G4 141 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 NPFFR1Q9GZQ6 430 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 GFRA4Q9GZZ7 299 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 GNB4Q9HAV0 340 aa13.51□□□□□ -0.25
SHOX-204ENST00000554971 TCRAP04437 139 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 Q8N2B8 174 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 LINC01006Q8NI28 216 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 BLNKQ8WV28 456 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 SLC25A39Q9BZJ4 359 aaPredicted RBP13.5□□□□□ -0.25
SHOX-204ENST00000554971 PRSS22Q9GZN4 317 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 Q9H3A6 140 aa13.5□□□□□ -0.25
SHOX-204ENST00000554971 TRAV34A0A0B4J273 112 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 LINC01548A6NM66 108 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 A8MWL6 223 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 M0QZK8 103 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 NDUFA7O95182 113 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 TCL1AP56279 114 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 HSPB9Q9BQS6 159 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 SAMD10Q9BYL1 202 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 K7EIM0 57 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms