RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 A6NNC1 897 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 M0R143 59 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 MRPS12O15235 138 aaKnown RBP10.16□□□□□ -0.78
SHMT2-205ENST00000553474 HSBP1O75506 76 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 LY6HO94772 140 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 HLA-DRB1P01911 266 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 KLK9Q2XQG4 91 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 VN1R17PQ8TDU5 208 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 FANCD2OSQ96PS1 177 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 FBXL7Q9UJT9 491 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 KLK9Q9UKQ9 250 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 CDKN1AP38936 164 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 PSG9Q00887 426 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 KLRD1Q13241 179 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 PMCHL1Q16048 86 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 PSG3Q16557 428 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 SAPCD1Q5SSQ6 148 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 GDF5OSQ5U4N7 250 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 LINC00322Q6ZN03 302 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-205ENST00000553474 GOLT1AQ6ZVE7 132 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 ZNF414Q96IQ9 312 aa10.16□□□□□ -0.78
SHMT2-205ENST00000553474 VWC2LB2RUY7 222 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 HAX1O00165 279 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 FAM106CPP0CH98 169 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 PMCHP20382 165 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 CAMPP49913 170 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 KRTDAPP60985 99 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 ASPHD1Q5U4P2 390 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 HIST2H2BCQ6DN03 193 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 NIT1Q86X76 327 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 GTSF1Q8WW33 167 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.78
SHMT2-205ENST00000553474 NDFIP1Q9BT67 221 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 FAM103A1Q9BTL3 118 aaKnown RBP10.15□□□□□ -0.78
SHMT2-205ENST00000553474 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 C21orf62Q9NYP8 219 aa10.15□□□□□ -0.78
SHMT2-205ENST00000553474 CENPEQ02224 2701 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 SNRPCP09234 159 aaKnown RBP10.14□□□□□ -0.79
SHMT2-205ENST00000553474 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
SHMT2-205ENST00000553474 RAB9AP51151 201 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 UBE2E1P51965 193 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 EFNA4P52798 201 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 TCF24Q7RTU0 167 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 EXOC3-AS1Q8N2X6 119 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 CIARTQ8N365 385 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-205ENST00000553474 GATD1Q8NB37 220 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 OR2D3Q8NGH3 330 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 SGK494Q96LW2 274 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 ARHGAP32A7KAX9 2087 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 IGHV2-70DA0A0C4DH43 119 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 C20orf202A1L168 122 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 NCBP2LA6PVI3 153 aaKnown RBP10.14□□□□□ -0.79
SHMT2-205ENST00000553474 CIDEAO60543 219 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 NDUFB8O95169 186 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 CSN1S1P47710 185 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 COX8CQ7Z4L0 72 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 Q8N976 141 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
SHMT2-205ENST00000553474 HECTD1Q9ULT8 2610 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 AKAP6Q13023 2319 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 H3BTX0 84 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 CD33P20138 364 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 Q56UQ5 140 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 KLHDC1Q8N7A1 406 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 PSG8Q9UQ74 426 aa10.13□□□□□ -0.79
SHMT2-205ENST00000553474 CRYBG3Q68DQ2 2970 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 A0A1B0GV90 55 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-205ENST00000553474 CHEK1O14757 476 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 PGLYRP4Q96LB8 373 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 UBTD1Q9HAC8 227 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
SHMT2-205ENST00000553474 LOC102724200A0A096LPH7 203 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 TRAV8-1A0A0A6YYK1 113 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 M0R2Z0 102 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 APOHP02749 345 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 NTF3P20783 257 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 ZFP36P26651 326 aaKnown RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 CTRLP40313 264 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 NUTF2P61970 127 aaKnown RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 RIGQ13278 110 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 SSBP4Q9BWG4 385 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 SNHG12Q9BXW3 62 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 DCHS2Q6V1P9 2916 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 LRBAP50851 2863 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.11□□□□□ -0.79
SHMT2-205ENST00000553474 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 A0A1W2PPR1 153 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 TOX4O94842 621 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 OR5AL1P0C617 328 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 CD24P25063 80 aa10.11□□□□□ -0.79
SHMT2-205ENST00000553474 NDPQ00604 133 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms