RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 UNQ5815/PRO19632Q6UWF5 114 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF705AQ6ZN79 300 aaPredicted RBP4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 TMEM182Q6ZP80 229 aaPredicted RBP4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 TBC1D26Q86UD7 250 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 LGI3Q8N145 548 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF738Q8NE65 137 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 KLHL30-AS1Q8NEE0 82 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 OR51G1Q8NGK1 321 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 OR4D5Q8NGN0 318 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 OR2G3Q8NGZ4 309 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 OR5B3Q8NH48 314 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 OR4S2Q8NH73 311 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 TP53RKQ96S44 253 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 RNF5Q99942 180 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 VAMP8Q9BV40 100 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 GNB4Q9HAV0 340 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 SLC2A9Q9NRM0 540 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 TSSC4Q9Y5U2 329 aaPredicted RBP4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 URGCP-MRPS24S4R325 110 aa4.31□□□□□ -1.72
SMARCC2-213ENST00000552627 TRAV30A0A087WSZ9 112 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 E7EUB6 86 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 H7BYZ3 331 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 K7ERU9 68 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 KBTBD11O94819 623 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 IGHV3-11P01762 117 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 G6PCP35575 357 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 KIR2DS2P43631 304 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 RAB11AP62491 216 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 CATR1Q13166 79 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 IZUMO4Q1ZYL8 232 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 SP6Q3SY56 376 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF585BQ52M93 769 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 CXorf66Q5JRM2 361 aaPredicted RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 PIK3CD-AS1Q5SR53 167 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF562Q6V9R5 426 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF695Q8IW36 515 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 CMTM1Q8IZ96 169 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 CCDC71LQ8N9Z2 235 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 TEX45Q8NA69 505 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 MBD3L1Q8WWY6 194 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 SRSF12Q8WXF0 261 aaKnown RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 PINX1Q96BK5 328 aaKnown RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 RARRES2Q99969 163 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 PSMG3Q9BT73 122 aaPredicted RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 PARD6GQ9BYG4 376 aaPredicted RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 NAA60Q9H7X0 242 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 WFDC1Q9HC57 220 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF355PQ9NSJ1 428 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 FUT9Q9Y231 359 aa4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 FOXA2Q9Y261 457 aaPredicted RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 MRPS16Q9Y3D3 137 aaKnown RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 LSM5Q9Y4Y9 91 aaKnown RBP4.3□□□□□ -1.72
SMARCC2-213ENST00000552627 TNCP24821 2201 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 G3V4G9 280 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 RHODO00212 210 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 RBFOX2O43251 390 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 KRASP01116 189 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 PRB2P02812 416 aaPredicted RBP4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 REG1AP05451 166 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 OR9G9P0C7N8 305 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 SCGB1A1P11684 91 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 F2RP25116 425 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 ATP6V0CP27449 155 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 GALR1P47211 349 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 RAB9AP51151 201 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 CRIP2P52943 208 aaPredicted RBP4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 PIGPP57054 158 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 TAS2R30P59541 319 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 RPL19P84098 196 aaKnown RBP4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 SERF2P84101 59 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 EWSR1Q01844 656 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 COX19Q49B96 90 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 TMEM41BQ5BJD5 291 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 TCF24Q7RTU0 167 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 MMD2Q8IY49 270 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF491Q8N8L2 437 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 OR4F17Q8NGA8 305 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 TMEM167AQ8TBQ9 72 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 OR4F4Q96R69 305 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 RNF2Q99496 336 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 SMIM3Q9BZL3 60 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 C11orf1Q9H5F2 150 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 MRPL27Q9P0M9 148 aaKnown RBP4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF580Q9UK33 172 aa4.29□□□□□ -1.72
SMARCC2-213ENST00000552627 TRBV9A0A0B4J1U6 114 aa4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 C3orf85A0A1B0GTC6 90 aa4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 ZNF705FA8MVS1 300 aaPredicted RBP4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 CCL24O00175 119 aa4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 UPK2O00526 184 aa4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 ACTL6BO94805 426 aa4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 IFNA5P01569 189 aa4.28□□□□□ -1.72
SMARCC2-213ENST00000552627 IGKV1-5P01602 117 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms