RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 BPIFA4PQ86YQ2 179 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 ZNF101Q8IZC7 436 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 LINC00311Q8N616 119 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 RNF182Q8N6D2 247 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 POM121L12Q8N7R1 296 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 CIB3Q96Q77 187 aaPredicted RBP2.84□□□□□ -1.96
USP44-208ENST00000552440 MIEN1Q9BRT3 115 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 SNRNP25Q9BV90 132 aaKnown RBP2.84□□□□□ -1.96
USP44-208ENST00000552440 PRO3102Q9H379 93 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 METTL1Q9UBP6 276 aaKnown RBP2.84□□□□□ -1.96
USP44-208ENST00000552440 SCP2D1Q9UJQ7 156 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 IER3IP1Q9Y5U9 82 aa2.84□□□□□ -1.96
USP44-208ENST00000552440 C4BP0C0L5 1744 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 ITSN1Q15811 1721 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 PCNX3Q9H6A9 2034 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 OTOFQ9HC10 1997 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 NUP210LQ5VU65 1888 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 KLF18A0A0U1RQI7 1052 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 A0A1W2PP18 115 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 TMEM223A0PJW6 202 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 A8MWP4 228 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 H7C423 109 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 K7ERJ3 54 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 SOD1P00441 154 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 HRASP01112 189 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 IGHV1-46P01743 117 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 SLC25A5P05141 298 aaKnown RBP2.83□□□□□ -1.96
USP44-208ENST00000552440 ZNF286BP0CG31 522 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 AQP4P55087 323 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 S100A10P60903 97 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 MYL5Q02045 173 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 ZC2HC1BQ5TFG8 222 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 SAXO1Q8IYX7 474 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 WFDC11Q8NEX6 87 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 RHOXF1Q8NHV9 184 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 ELSPBP1Q96BH3 223 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 DPH3Q96FX2 82 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 TTTY13Q9BZ97 58 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 EPDR1Q9UM22 224 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 C5P01031 1676 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 ATG2BQ96BY7 2078 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 ANKRD31Q8N7Z5 1873 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 SCN4AP35499 1836 aa2.83□□□□□ -1.96
USP44-208ENST00000552440 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 A6NED7 52 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 UQCRQO14949 82 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 MPC2O95563 127 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 HLA-DRB4P13762 266 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 PABPC1L2AQ5JQF8 200 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 C9orf129Q5T035 196 aaKnown RBP2.82□□□□□ -1.96
USP44-208ENST00000552440 TEN1Q86WV5 123 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 HIST3H2BBQ8N257 126 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 PRELID3AQ96N28 172 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 HIST1H2BLQ99880 126 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 UPK3BQ9BT76 320 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 SPANXDQ9BXN6 97 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 NPCDR1Q9BY65 106 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 Q9H521 79 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 DUSP21Q9H596 190 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TAS2R8Q9NYW2 309 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 ZNRD1Q9P1U0 126 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 V9GYS6 101 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 HLA-DRB4X5D2U9 266 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 LAMA3Q16787 3333 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 C4AP0C0L4 1744 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TOGARAM1Q9Y4F4 1720 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 UBR3Q6ZT12 1888 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TRIOBPQ9H2D6 2365 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 ADGRB1O14514 1584 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 A6NDX4 124 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TNFP01375 233 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 IGKV1D-33P01593 117 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 IGKV1-33P01594 117 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TRGV3P03979 118 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 FXYD7P58549 80 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TMEM258P61165 79 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 KISS1Q15726 138 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 C10orf91Q5T1B1 145 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 ZFP2Q6ZN57 461 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TMEM91Q6ZNR0 172 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 MIR17HGQ75NE6 70 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 Q8N9W7 124 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 C5orf17Q8NAS9 161 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 MORN4Q8NDC4 146 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 LINC01560Q8TB33 94 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 C16orf95Q9H693 158 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 RPRMQ9NS64 109 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 COMMD3Q9UBI1 195 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 ZNF222Q9UK12 451 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 TMEM14AQ9Y6G1 99 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 HCFC1P51610 2035 aa2.82□□□□□ -1.96
USP44-208ENST00000552440 ATG2AQ2TAZ0 1938 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 CACNA1AO00555 2505 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 MAST2Q6P0Q8 1798 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 C11orf94C9JXX5 98 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 SLC25A20O43772 301 aa2.81□□□□□ -1.96
USP44-208ENST00000552440 SH2D1AO60880 128 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms