RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 WFDC1Q9HC57 220 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 CYTL1Q9NRR1 136 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 TECRQ9NZ01 308 aaKnown RBP4.34□□□□□ -1.71
SCAF11-213ENST00000550629 MRPL27Q9P0M9 148 aaKnown RBP4.34□□□□□ -1.71
SCAF11-213ENST00000550629 IGHV7-4-1A0A0J9YVY3 117 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 A0A1W2PS18 150 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 TMEM213A2RRL7 107 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 C2orf70A6NJV1 201 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 MBP02144 154 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 FOLR2P14207 255 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 CBLN1P23435 193 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 B2MP61769 119 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 LGALSLQ3ZCW2 172 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-213ENST00000550629 RPL7L1Q6DKI1 246 aaKnown RBP4.33□□□□□ -1.72
SCAF11-213ENST00000550629 HIST2H2BDQ6DRA6 164 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 LAMTOR1Q6IAA8 161 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 IL34Q6ZMJ4 242 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 OR1L4Q8NGR5 311 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 OR2K2Q8NGT1 345 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 GATAD1Q8WUU5 269 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 GRAMD2BQ96HH9 432 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 GPR82Q96P67 336 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 RNF2Q99496 336 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 C20orf24Q9BUV8 137 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 VSIRQ9H7M9 311 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 DNAJC4Q9NNZ3 241 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 ZMAT5Q9UDW3 170 aaKnown RBP4.33□□□□□ -1.72
SCAF11-213ENST00000550629 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 RABAC1Q9UI14 185 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 PXMP4Q9Y6I8 212 aa4.33□□□□□ -1.72
SCAF11-213ENST00000550629 ANK2Q01484 3957 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 TRAV25A0A0B4J276 109 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 HELTA6NFD8 242 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 SEC14L6B5MCN3 397 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 UMAD1C9J7I0 102 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 CSN3P07498 182 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 SEC11BP0C7V7 166 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 SPP1P10451 314 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 TPT1P13693 172 aaKnown RBP4.32□□□□□ -1.72
SCAF11-213ENST00000550629 ORM2P19652 201 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 ATP6V0CP27449 155 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 LYZP61626 148 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 USF2Q15853 346 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-213ENST00000550629 C9orf66Q5T8R8 295 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 SAMD13Q5VXD3 122 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 C10orf113Q5VZT2 155 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 MIC13Q5XKP0 118 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 TMEM182Q6ZP80 229 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-213ENST00000550629 SLC51BQ86UW2 128 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 BAP18Q8IXM2 172 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 HSD17B11Q8NBQ5 300 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 OR1B1Q8NGR6 318 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 PHYHIPLQ96FC7 376 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 SHANK2-AS3Q9BTD1 123 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 RSG1Q9BU20 258 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 PBDC1Q9BVG4 233 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 RHPN1-AS1Q9BWJ2 59 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 ZNF471Q9BX82 626 aaPredicted RBP4.32□□□□□ -1.72
SCAF11-213ENST00000550629 MRPL32Q9BYC8 188 aaKnown RBP4.32□□□□□ -1.72
SCAF11-213ENST00000550629 HIGD1AQ9Y241 93 aa4.32□□□□□ -1.72
SCAF11-213ENST00000550629 TRAV2A0A0B4J234 112 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 H3BRN7 92 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 CHEK1O14757 476 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 BUB3O43684 328 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 SAP30O75446 220 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 IGLV1-51P01701 117 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 OR5G3P0C626 314 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 RPL7P18124 248 aaKnown RBP4.31□□□□□ -1.72
SCAF11-213ENST00000550629 M6PRP20645 277 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-213ENST00000550629 MEOX2P50222 304 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 RAB5CP51148 216 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 RHOBP62745 196 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 ACOT6Q3I5F7 207 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-213ENST00000550629 FFAR4Q5NUL3 377 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 LCN12Q6JVE5 192 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 C16orf54Q6UWD8 224 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 PATE2Q6UY27 113 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 DPPA3Q6W0C5 159 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 ADAMTSL5Q6ZMM2 481 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 STXBP6Q8NFX7 210 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 DYNLRB2Q8TF09 96 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 TMEM37Q8WXS4 190 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 SLC25A39Q9BZJ4 359 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-213ENST00000550629 SH3BGRL3Q9H299 93 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 TMEM14CQ9P0S9 112 aa4.31□□□□□ -1.72
SCAF11-213ENST00000550629 NBEAL1Q6ZS30 2694 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 WNK1Q9H4A3 2382 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 IGHV3OR16-8A0A075B7F1 116 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 ZNF98A6NK75 572 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 BOLA2-SMG1P6H3BVE0 249 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 TSPAN4O14817 238 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 ZNF207O43670 478 aaKnown RBP4.3□□□□□ -1.72
SCAF11-213ENST00000550629 PRSS2P07478 247 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 GALR1P47211 349 aa4.3□□□□□ -1.72
SCAF11-213ENST00000550629 NKX2-5P52952 324 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-213ENST00000550629 TAS2R45P59539 299 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms