RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 LOC102723971A0A1B0GUV8 181 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 CST7O76096 145 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 CAMLGP49069 296 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 B2MP61769 119 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 OXA1LQ15070 435 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 OR8A1Q8NGG7 326 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 TMEM37Q8WXS4 190 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 TMEM208Q9BTX3 173 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 UQCC1Q9NVA1 299 aa13.32□□□□□ -0.28
CHMP1A-203ENST00000547614 FAM24AA6NFZ4 105 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 S100A11P31949 105 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 VWC2Q2TAL6 325 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 LCN15Q6UWW0 184 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 Q6ZRG5 221 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 FAM210BQ96KR6 192 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 NDUFAF3Q9BU61 184 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 DNAJC4Q9NNZ3 241 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 LYRM2Q9NU23 88 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
CHMP1A-203ENST00000547614 M0R2Z0 102 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 INSP01308 110 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 SULT1A1P50225 295 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 RAB32Q13637 225 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 C10orf113Q5VZT2 155 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 NRARPQ7Z6K4 114 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 SLC50A1Q9BRV3 221 aa13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 YTHDF2Q9Y5A9 579 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-203ENST00000547614 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 A6NHS1 94 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 S100A10P60903 97 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 HBG1P69891 147 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 HBG2P69892 147 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 STX12Q86Y82 276 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 CHAC2Q8WUX2 184 aa13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-203ENST00000547614 UPK1BO75841 260 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 P0DMU3 169 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 TSPOP30536 169 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 RPL29P47914 159 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 RHOBP62745 196 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 OPCMLQ14982 345 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 ATP6V1FQ16864 119 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 OR1L4Q8NGR5 311 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 ENKURQ8TC29 256 aa13.28□□□□□ -0.28
CHMP1A-203ENST00000547614 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 MORN5Q5VZ52 161 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 MIC13Q5XKP0 118 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 PFDN5Q99471 154 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 PPP1R14DQ9NXH3 145 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 PXMP4Q9Y6I8 212 aa13.27□□□□□ -0.29
CHMP1A-203ENST00000547614 VPS13DQ5THJ4 4388 aa13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 IGLC2P0DOY2 106 aa13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 GUK1Q16774 197 aa13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 SAT2Q96F10 170 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 PTTG2Q9NZH5 202 aa13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
CHMP1A-203ENST00000547614 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 ZNF705GA8MUZ8 300 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 MPDU1O75352 247 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 DAD1P61803 113 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 BAXQ07812 192 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 SLC39A9Q9NUM3 307 aa13.25□□□□□ -0.29
CHMP1A-203ENST00000547614 UBE2L5PA0A1B0GUS4 154 aa13.24□□□□□ -0.29
CHMP1A-203ENST00000547614 H3BQ15 152 aa13.24□□□□□ -0.29
CHMP1A-203ENST00000547614 PRAF2O60831 178 aa13.24□□□□□ -0.29
CHMP1A-203ENST00000547614 RLN2P04090 185 aa13.24□□□□□ -0.29
CHMP1A-203ENST00000547614 CDKN1BP46527 198 aa13.24□□□□□ -0.29
CHMP1A-203ENST00000547614 SLC17A3O00476 420 aa13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 TAS2R60P59551 318 aa13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 CYCSP99999 105 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 IFITM3Q01628 133 aa13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 LINC01587Q99440 93 aa13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 NMES1Q9C002 83 aa13.23□□□□□ -0.29
CHMP1A-203ENST00000547614 TRAV5A0A0B4J249 113 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 E5RGE8 158 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 ZNF253O75346 499 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 PRM2P04554 102 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 FGF7P21781 194 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 SLC25A31Q9H0C2 315 aa13.22□□□□□ -0.29
CHMP1A-203ENST00000547614 FRAS1Q86XX4 4008 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms