RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 MS4A6AQ9H2W1 248 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 HRH4Q9H3N8 390 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 AAMDCQ9H7C9 122 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 TRAV2A0A0B4J234 112 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 IFNA1P01562 189 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 SNRPCP09234 159 aaKnown RBP8.96□□□□□ -0.98
DDB1-223ENST00000543658 NBEAP1P0C6P0 100 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 IGLC2P0DOY2 106 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 PSMB3P49720 205 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 SNRPD3P62318 126 aaKnown RBP8.96□□□□□ -0.98
DDB1-223ENST00000543658 PSG9Q00887 426 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 PDE6HQ13956 83 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 FAM90A2PQ658T7 463 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.96□□□□□ -0.98
DDB1-223ENST00000543658 H3BTX0 84 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 MRPS12O15235 138 aaKnown RBP8.95□□□□□ -0.98
DDB1-223ENST00000543658 ZNF253O75346 499 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 GTSCR1Q86UQ5 136 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 FXYD5Q96DB9 178 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 ZNF503Q96F45 646 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 ZNF586Q9NXT0 402 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 CLEC5AQ9NY25 188 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 SMAD5-AS1Q9Y6J3 95 aa8.95□□□□□ -0.98
DDB1-223ENST00000543658 TRBV19A0A075B6N1 114 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 IZUMO1RA6ND01 250 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 H3BQ15 152 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 ISLRO14498 428 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 CMC4P56277 68 aaPredicted RBP8.94□□□□□ -0.98
DDB1-223ENST00000543658 UBE2G2P60604 165 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 OXLD1Q5BKU9 147 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 LINC00052Q96N35 136 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 TMPRSS5Q9H3S3 457 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 MANBALQ9NQG1 85 aa8.94□□□□□ -0.98
DDB1-223ENST00000543658 SORL1Q92673 2214 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 K7EQG2 157 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 ZNF688P0C7X2 276 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 RANP62826 216 aaKnown RBP8.93□□□□□ -0.98
DDB1-223ENST00000543658 IFITM2Q01629 132 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 ZNF738Q8NE65 137 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 CMTM2Q8TAZ6 248 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 DCANP1Q8TF63 244 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 PCNPQ8WW12 178 aaKnown RBP8.93□□□□□ -0.98
DDB1-223ENST00000543658 C17orf77Q96MU5 243 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 Q9H3A6 140 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 ZNF331Q9NQX6 463 aaPredicted RBP8.93□□□□□ -0.98
DDB1-223ENST00000543658 GNG13Q9P2W3 67 aa8.93□□□□□ -0.98
DDB1-223ENST00000543658 ZNF256Q9Y2P7 627 aaPredicted RBP8.93□□□□□ -0.98
DDB1-223ENST00000543658 SLC17A3O00476 420 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 WIPF1O43516 503 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 TAGLN2P37802 199 aaKnown RBP8.92□□□□□ -0.98
DDB1-223ENST00000543658 CSN1S1P47710 185 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 CD81P60033 236 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 PSMG4Q5JS54 123 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 CST9LP1Q5W188 147 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 NKX6-2Q9C056 277 aaPredicted RBP8.92□□□□□ -0.98
DDB1-223ENST00000543658 OTORQ9NRC9 128 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 RPH3ALQ9UNE2 315 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 PRELID1Q9Y255 219 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
DDB1-223ENST00000543658 ANK2Q01484 3957 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 A0A1W2PRE2 83 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 PGPA6NDG6 321 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 G3V4G9 280 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 PAGE4O60829 102 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 SLC25A5P05141 298 aaKnown RBP8.91□□□□□ -0.98
DDB1-223ENST00000543658 NMBP08949 121 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 ICAM4Q14773 271 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 SUN5Q8TC36 379 aa8.91□□□□□ -0.98
DDB1-223ENST00000543658 DNHD1Q96M86 4753 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 SOCS3O14543 225 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 RGS13O14921 159 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 NDUFB4O95168 129 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 DEFB131AP59861 70 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 PSG3Q16557 428 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 HAGHQ16775 308 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 CLLU1Q5K131 121 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 EXOC3-AS1Q8N2X6 119 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 RNF182Q8N6D2 247 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 RXFP4Q8TDU9 374 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 MRPL53Q96EL3 112 aaKnown RBP8.9□□□□□ -0.98
DDB1-223ENST00000543658 MAP6D1Q9H9H5 199 aa8.9□□□□□ -0.98
DDB1-223ENST00000543658 FAM74A7A6NL05 159 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 F6UZH7 168 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 K7EQM0 130 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 BCL2P10415 239 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 SUMO1P63165 101 aaKnown RBP8.89□□□□□ -0.99
DDB1-223ENST00000543658 CCL20P78556 96 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 BEAN1Q3B7T3 259 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 IGFL4Q6B9Z1 124 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 FAM24BQ8N5W8 94 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 C5orf17Q8NAS9 161 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 LYPD6BQ8NI32 183 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 TXNDC17Q9BRA2 123 aa8.89□□□□□ -0.99
DDB1-223ENST00000543658 EIF5A2Q9GZV4 153 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms