RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 Q6ZTI0 123 aa12.18□□□□□ -0.46
RAP1B-228ENST00000542145 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
RAP1B-228ENST00000542145 CCDC28AQ8IWP9 274 aa12.18□□□□□ -0.46
RAP1B-228ENST00000542145 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
RAP1B-228ENST00000542145 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
RAP1B-228ENST00000542145 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
RAP1B-228ENST00000542145 SNURFLB1AK76 121 aa12.17□□□□□ -0.46
RAP1B-228ENST00000542145 DISC1C4P0D8 188 aa12.17□□□□□ -0.46
RAP1B-228ENST00000542145 AKR1C4P17516 323 aa12.17□□□□□ -0.46
RAP1B-228ENST00000542145 RPL7P18124 248 aaKnown RBP12.17□□□□□ -0.46
RAP1B-228ENST00000542145 UBR4Q5T4S7 5183 aa12.16□□□□□ -0.46
RAP1B-228ENST00000542145 PITX3O75364 302 aa12.16□□□□□ -0.46
RAP1B-228ENST00000542145 S100A7P31151 101 aa12.16□□□□□ -0.46
RAP1B-228ENST00000542145 GFI1BQ5VTD9 330 aa12.16□□□□□ -0.46
RAP1B-228ENST00000542145 NFE4Q86UQ8 179 aa12.16□□□□□ -0.46
RAP1B-228ENST00000542145 A0A087X0K7 114 aa12.15□□□□□ -0.46
RAP1B-228ENST00000542145 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
RAP1B-228ENST00000542145 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
RAP1B-228ENST00000542145 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
RAP1B-228ENST00000542145 FUNDC2Q9BWH2 189 aa12.15□□□□□ -0.46
RAP1B-228ENST00000542145 RAP2BP61225 183 aa12.14□□□□□ -0.47
RAP1B-228ENST00000542145 SSBP1Q04837 148 aaKnown RBP12.14□□□□□ -0.47
RAP1B-228ENST00000542145 DAZ2Q13117 558 aaKnown RBP12.14□□□□□ -0.47
RAP1B-228ENST00000542145 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
RAP1B-228ENST00000542145 AKAIN1P0CW23 69 aa12.13□□□□□ -0.47
RAP1B-228ENST00000542145 AKR1C1Q04828 323 aa12.13□□□□□ -0.47
RAP1B-228ENST00000542145 PRRT1Q99946 306 aa12.13□□□□□ -0.47
RAP1B-228ENST00000542145 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
RAP1B-228ENST00000542145 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 J3KRW8 73 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 HYPMO75409 117 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 ATP6V1G2O95670 118 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 CCDC190Q86UF4 302 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 MIXL1Q9H2W2 232 aa12.12□□□□□ -0.47
RAP1B-228ENST00000542145 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 TRAV12-3A0A0B4J271 114 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 MRPS12O15235 138 aaKnown RBP12.11□□□□□ -0.47
RAP1B-228ENST00000542145 IL5P05113 134 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
RAP1B-228ENST00000542145 OR5G3P0C626 314 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
RAP1B-228ENST00000542145 AP3S1Q92572 193 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 TMEM70Q9BUB7 260 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 VCX3AQ9NNX9 186 aa12.11□□□□□ -0.47
RAP1B-228ENST00000542145 ZNF331Q9NQX6 463 aaPredicted RBP12.11□□□□□ -0.47
RAP1B-228ENST00000542145 WRBO00258 174 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 PLP1P60201 277 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 LYPD5Q6UWN5 251 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 SMIM4Q8WVI0 70 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 ICOSQ9Y6W8 199 aa12.1□□□□□ -0.47
RAP1B-228ENST00000542145 A0A087WXM4 84 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 PAX4O43316 350 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 SYNGR2O43760 224 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 ZNF324O75467 553 aaPredicted RBP12.09□□□□□ -0.47
RAP1B-228ENST00000542145 MED6O75586 246 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 LINC00869P0C866 280 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 RPP30P78346 268 aaKnown RBP12.09□□□□□ -0.47
RAP1B-228ENST00000542145 SRPXP78539 464 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 MRPS10P82664 201 aaKnown RBP12.09□□□□□ -0.47
RAP1B-228ENST00000542145 SPANXN5Q5MJ07 72 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 PATE2Q6UY27 113 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
RAP1B-228ENST00000542145 FUT9Q9Y231 359 aa12.09□□□□□ -0.47
RAP1B-228ENST00000542145 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 LINC00854A0A1B0GVQ3 168 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 H3BP45 60 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 ANXA3P12429 323 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
RAP1B-228ENST00000542145 ZBTB8BQ8NAP8 495 aaPredicted RBP12.08□□□□□ -0.48
RAP1B-228ENST00000542145 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 ZNF431Q8TF32 576 aaPredicted RBP12.08□□□□□ -0.48
RAP1B-228ENST00000542145 SCGB3A2Q96PL1 93 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 PYGO2Q9BRQ0 406 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 FAM30AQ9NZY2 134 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 LY96Q9Y6Y9 160 aa12.08□□□□□ -0.48
RAP1B-228ENST00000542145 HMCN2Q8NDA2 5059 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 IGLV5-52A0A0A0MRZ9 124 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 TRGV1A0A0A0MS02 117 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 SMCO3A2RU48 225 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 CT45A10P0DMU9 189 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 SLC25A6P12236 298 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 SERTAD4-AS1Q5TG53 156 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 LCN15Q6UWW0 184 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 SCP2D1Q9UJQ7 156 aa12.07□□□□□ -0.48
RAP1B-228ENST00000542145 DNAH8Q96JB1 4490 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 NPIPB6E9PJ23 425 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 H3BTX0 84 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 CXCL2P19875 107 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 SLC50A1Q9BRV3 221 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 NAA50Q9GZZ1 169 aaKnown RBP12.06□□□□□ -0.48
RAP1B-228ENST00000542145 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
RAP1B-228ENST00000542145 SLC17A3O00476 420 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms