RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 COMMD3Q9UBI1 195 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 OPTCQ9UBM4 332 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 VPREB3Q9UKI3 123 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 NACAE9PAV3 2078 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 HEATR1Q9H583 2144 aaKnown RBP2.6□□□□□ -1.99
SNHG1-217ENST00000541578 USF3Q68DE3 2245 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 CUBNO60494 3623 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MED12LQ86YW9 2145 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 TRGV5A0A0B4J1U4 118 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 SMIM9A6NGZ8 99 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 B4DEV8 164 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 F5H768 121 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 C15orf65H3BRN8 121 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 K7EPK0 472 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 GNG7O60262 68 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF324O75467 553 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 PMP2P02689 132 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 STATHP02808 62 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 UBBP0CG47 229 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 HIST1H1EP10412 219 aaKnown RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 GADD45AP24522 165 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 PSMA1P25786 263 aaKnown RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MIPP30301 263 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 CTBP2P56545 445 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 RUNX1Q01196 453 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 LTC4SQ16873 150 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 IQCJQ1A5X6 159 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 LGALSLQ3ZCW2 172 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MRPL2Q5T653 305 aaKnown RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM244Q5VVB8 128 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 SCGB1D4Q6XE38 83 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 TCF23Q7RTU1 214 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 C3orf56Q8N813 242 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 OR4D11Q8NGI4 311 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 OR5A2Q8NGI9 324 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 OR2K2Q8NGT1 345 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 GPR119Q8TDV5 335 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 CANT1Q8WVQ1 401 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 ARL11Q969Q4 196 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 GALMQ96C23 342 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 SLC35G5Q96KT7 338 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MCEEQ96PE7 176 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 TRIB3Q96RU7 358 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MIEN1Q9BRT3 115 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 PSMG3Q9BT73 122 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 SNRNP25Q9BV90 132 aaKnown RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 PLA2G12AQ9BZM1 189 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 LINC00470Q9BZP3 86 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 OR8D2Q9GZM6 311 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MED28Q9H204 178 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 UBQLN4Q9NRR5 601 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MED29Q9NX70 200 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 MRPL27Q9P0M9 148 aaKnown RBP2.59□□□□□ -1.99
SNHG1-217ENST00000541578 SS18L2Q9UHA2 77 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 NAT8Q9UHE5 227 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 TRAPPC2LQ9UL33 140 aa2.59□□□□□ -1.99
SNHG1-217ENST00000541578 CR1P17927 2039 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 A0A0G2JND7 137 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 TINCRA0A1B0GVN0 87 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 EXOC1LA0A1B0GW35 172 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 IZUMO1RA6ND01 250 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 IFITM5A6NNB3 132 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 ZNF878C9JN71 531 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 CDS2O95674 445 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 HAND1O96004 215 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 CFDP00746 253 aaPredicted RBP2.58□□□□□ -2
SNHG1-217ENST00000541578 HBZP02008 142 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 OPN1SWP03999 348 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 IGLV7-43P04211 117 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 IGKV3-11P04433 115 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 ESDP10768 282 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 PTHLHP12272 177 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 HIST1H1TP22492 207 aaPredicted RBP2.58□□□□□ -2
SNHG1-217ENST00000541578 DEFB110Q30KQ9 67 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 SP6Q3SY56 376 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 SPIN4Q56A73 249 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 KHDC3LQ587J8 217 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 FAM104BQ5XKR9 115 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 SLC25A34Q6PIV7 304 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 HIST2H3AQ71DI3 136 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 NEGR1Q7Z3B1 354 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 SGPP2Q8IWX5 399 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 HIST3H2BBQ8N257 126 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 SLC35G3Q8N808 338 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 OR52L1Q8NGH7 329 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 OR8S1Q8NH09 359 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 HAVCR2Q8TDQ0 301 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 GPR146Q96CH1 333 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 IMP4Q96G21 291 aaKnown RBP2.58□□□□□ -2
SNHG1-217ENST00000541578 TBX5Q99593 518 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 PRSS27Q9BQR3 290 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 TAF9BQ9HBM6 251 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 MRPL16Q9NX20 251 aaKnown RBP2.58□□□□□ -2
SNHG1-217ENST00000541578 HSPB8Q9UJY1 196 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 TRAPPC1Q9Y5R8 145 aa2.58□□□□□ -2
SNHG1-217ENST00000541578 BORCS7-ASMTA0A0B4J1R7 106 aa2.57□□□□□ -2
SNHG1-217ENST00000541578 TRAV38-1A0A0B4J264 116 aa2.57□□□□□ -2
SNHG1-217ENST00000541578 LOC285095A0A1B0GVY8 99 aa2.57□□□□□ -2
SNHG1-217ENST00000541578 HMSDA8MTL9 139 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms