RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 PUSL1Q8N0Z8 303 aaKnown RBP6.38□□□□□ -1.39
USP28-205ENST00000537706 TMEM252Q8N6L7 170 aa6.38□□□□□ -1.39
USP28-205ENST00000537706 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
USP28-205ENST00000537706 RAB40CQ96S21 281 aa6.38□□□□□ -1.39
USP28-205ENST00000537706 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
USP28-205ENST00000537706 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
USP28-205ENST00000537706 WFDC1Q9HC57 220 aa6.38□□□□□ -1.39
USP28-205ENST00000537706 GOLT1BQ9Y3E0 138 aa6.38□□□□□ -1.39
USP28-205ENST00000537706 YTHDF2Q9Y5A9 579 aaKnown RBP6.38□□□□□ -1.39
USP28-205ENST00000537706 LOC102723971A0A1B0GUV8 181 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 FAM24AA6NFZ4 105 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 FAM90A26D6RGX4 464 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 K7EQG2 157 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 ATG12O94817 140 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 LPAR6P43657 344 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 STX12Q86Y82 276 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 VKORC1L1Q8N0U8 176 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 HSD17B10Q99714 261 aaKnown RBP6.37□□□□□ -1.39
USP28-205ENST00000537706 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 CACNG5Q9UF02 275 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 LINC00473A8K010 186 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 TMEM50AO95807 157 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 P0C879 139 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 M6PRP20645 277 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 RAB5CP51148 216 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 NHLH2Q02577 135 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 RRN3P1Q2M238 152 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 Q6ZRG5 221 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 LINC00528Q8N1L1 170 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 BPIFCQ8NFQ6 507 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 UPK3BQ9BT76 320 aa6.37□□□□□ -1.39
USP28-205ENST00000537706 STRAPQ9Y3F4 350 aaKnown RBP6.37□□□□□ -1.39
USP28-205ENST00000537706 IGHV3-21A0A0B4J1V1 117 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 SYNGR2O43760 224 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 SULT1A1P50225 295 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 PAX9P55771 341 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 TAS2R30P59541 319 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 OR2B11Q5JQS5 317 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 OR5C1Q8NGR4 320 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 LYPD6BQ8NI32 183 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 TCTEX1D2Q8WW35 142 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 ATP5SQ99766 215 aa6.36□□□□□ -1.39
USP28-205ENST00000537706 SCO1O75880 301 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 NXPH3O95157 252 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 CTSGP08311 255 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 MFAP4P55083 255 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 SNRPD3P62318 126 aaKnown RBP6.35□□□□□ -1.39
USP28-205ENST00000537706 RPL30P62888 115 aaKnown RBP6.35□□□□□ -1.39
USP28-205ENST00000537706 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 SPAG16Q8N0X2 631 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 LILRB2Q8N423 598 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 HSD17B11Q8NBQ5 300 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 TXN2Q99757 166 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 A0A087WTM6 91 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 IGHV3-66A0A0C4DH42 116 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 IGLC7A0M8Q6 106 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 TMEM218A2RU14 115 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 HELTA6NFD8 242 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 LYRM9A8MSI8 78 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 UMAD1C9J7I0 102 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 RBFOX2O43251 390 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP28-205ENST00000537706 ATP5G1P05496 136 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 ATP5G3P48201 142 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 IZUMO4Q1ZYL8 232 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 SUN5Q8TC36 379 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 GNPNAT1Q96EK6 184 aaPredicted RBP6.35□□□□□ -1.39
USP28-205ENST00000537706 QTRT1Q9BXR0 403 aaKnown RBP6.35□□□□□ -1.39
USP28-205ENST00000537706 SH3BGRL3Q9H299 93 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 BET1LQ9NYM9 111 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 HSPB7Q9UBY9 170 aa6.35□□□□□ -1.39
USP28-205ENST00000537706 IGLV5-52A0A0A0MRZ9 124 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 CST7O76096 145 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 APOC3P02656 99 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 OR13C7P0DN81 318 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 NPPCP23582 126 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 ATP6V0CP27449 155 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 ASIPP42127 132 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 CAMLGP49069 296 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 BRWD1-AS2P59051 145 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 C10orf91Q5T1B1 145 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 Q6ZRN7 208 aaPredicted RBP6.34□□□□□ -1.39
USP28-205ENST00000537706 CACFD1Q9UGQ2 172 aa6.34□□□□□ -1.39
USP28-205ENST00000537706 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
USP28-205ENST00000537706 MRPS16Q9Y3D3 137 aaKnown RBP6.34□□□□□ -1.39
USP28-205ENST00000537706 H3BP45 60 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 GNG7O60262 68 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 IAPPP10997 89 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 ADCYAP1P18509 176 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 G6PCP35575 357 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 HBG1P69891 147 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 HBG2P69892 147 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 TMEM182Q6ZP80 229 aaPredicted RBP6.33□□□□□ -1.4
USP28-205ENST00000537706 RNF125Q96EQ8 232 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.33□□□□□ -1.4
USP28-205ENST00000537706 UQCC1Q9NVA1 299 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 PSENENQ9NZ42 101 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 F11RQ9Y624 299 aaKnown RBP6.33□□□□□ -1.4
USP28-205ENST00000537706 RNF213Q63HN8 5207 aa6.33□□□□□ -1.4
USP28-205ENST00000537706 MARCH11A6NNE9 402 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms