RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 EBI3Q14213 229 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 TNXAQ16473 311 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 COL5A1-AS1Q5SY13 56 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 RASL11AQ6T310 242 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 PPP1R27Q86WC6 154 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 SIGLECL1Q8N7X8 197 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 GNB4Q9HAV0 340 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 HIVEP2P31629 2446 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 F8P00451 2351 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 IZUMO1RA6ND01 250 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 CD5LO43866 347 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 FRMD6-AS1P0C7T7 363 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 CTRLP40313 264 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 KRTDAPP60985 99 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 OR10J3Q5JRS4 329 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 C19orf35Q6ZS72 473 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 LINC00305Q7Z4B0 112 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 WIPF2Q8TF74 440 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 YAE1D1Q9NRH1 226 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 CBY1Q9Y3M2 126 aa10.17□□□□□ -0.78
CDK5RAP3-202ENST00000536708 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 IGHV4-59P01825 116 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 AMY1AP04745 511 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 GPX1P07203 203 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 FAM106CPP0CH98 169 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 NDPQ00604 133 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 NPBQ8NG41 125 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 KCNS1Q96KK3 526 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 SRSF8Q9BRL6 282 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 MEGF9Q9H1U4 602 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 KLF12Q9Y4X4 402 aa10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 F11RQ9Y624 299 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-202ENST00000536708 TEX22C9J3V5 150 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 REG1AP05451 166 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 MGST1P10620 155 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 FXYD3Q14802 87 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 C5orf64Q2M2E5 130 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 FAM103A1Q9BTL3 118 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 EPDR1Q9UM22 224 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 SPATA45Q537H7 98 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 Q8N9W7 124 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 GRAMD2BQ96HH9 432 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 LINC00479Q96M42 142 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 NRN1Q9NPD7 142 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 NAT8BQ9UHF3 227 aa10.15□□□□□ -0.78
CDK5RAP3-202ENST00000536708 HYPMO75409 117 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 AMTP48728 403 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 Q71RC1 249 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SRSF12Q8WXF0 261 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 MAST4O15021 2626 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ZNF253O75346 499 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TFPI2P48307 235 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 DUX5Q96PT3 197 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 UQCR10Q9UDW1 63 aa10.14□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TEP1Q99973 2627 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NBEAP1P0C6P0 100 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ORM2P19652 201 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 PMCHP20382 165 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 C9orf139Q6ZV77 190 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ARL6IP6Q8N6S5 226 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 C5orf56Q8N8D9 126 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NUDT10Q8NFP7 164 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 OR1B1Q8NGR6 318 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NUDT11Q96G61 164 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 MLST8Q9BVC4 326 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SERTAD4Q9NUC0 356 aa10.13□□□□□ -0.79
CDK5RAP3-202ENST00000536708 FN1P02751 2386 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 A0A1W2PS18 150 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 BMPR1BO00238 502 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 LY6G6DO95868 133 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 HIST1H1EP10412 219 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 GP9P14770 177 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 RCHY1Q96PM5 261 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ZNF331Q9NQX6 463 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 PGPA6NDG6 321 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 A6NDX4 124 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 LINC01548A6NM66 108 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 I3L2K1 104 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ZNF324O75467 553 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 CNIH1O95406 144 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 IGLC1P0CG04 106 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 HNRNPA3P51991 378 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TCL1AP56279 114 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 KIAA1644Q3SXP7 199 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 C5orf17Q8NAS9 161 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TSKUQ8WUA8 353 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 GPR82Q96P67 336 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 MOB4Q9Y3A3 225 aa10.12□□□□□ -0.79
CDK5RAP3-202ENST00000536708 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TRAV34A0A0B4J273 112 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms