RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RFNGQ9Y644 331 aa16.6■□□□□ 0.25
SFSWAP-204ENST00000535399 A0A0J9YX75 114 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 TMEM41BQ5BJD5 291 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 FAM78BQ5VT40 261 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 EBLN2Q6P2I7 272 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 LCN15Q6UWW0 184 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 CLUHP3Q96NS8 147 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 ZNF331Q9NQX6 463 aaPredicted RBP16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 TMEM14CQ9P0S9 112 aa16.59■□□□□ 0.25
SFSWAP-204ENST00000535399 H3BTX0 84 aa16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 SLC17A3O00476 420 aa16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 FFAR4Q5NUL3 377 aa16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 MIR17HGQ75NE6 70 aa16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 INO80EQ8NBZ0 244 aaPredicted RBP16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 LRRC20Q8TCA0 184 aa16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 SAT2Q96F10 170 aaPredicted RBP16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 FAM167A-AS1Q96KT0 104 aa16.58■□□□□ 0.24
SFSWAP-204ENST00000535399 IGKV3-20P01619 116 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF266Q14584 549 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 PSG3Q16557 428 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF738Q8NE65 137 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 SLC50A1Q9BRV3 221 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 SLC25A2Q9BXI2 301 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF586Q9NXT0 402 aa16.57■□□□□ 0.24
SFSWAP-204ENST00000535399 A8MTW9 85 aa16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 SMLR1H3BR10 107 aa16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 GUK1Q16774 197 aa16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 CSNK1G2-AS1Q8NCQ2 148 aa16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 OR4B1Q8NGF8 309 aa16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 MUC7Q8TAX7 377 aa16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 MRPL32Q9BYC8 188 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-204ENST00000535399 PYYP10082 97 aa16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 HIST1H1EP10412 219 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 NUTF2P61970 127 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 OR11H2Q8NH07 326 aa16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 RARRES2Q99969 163 aa16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 CLEC5AQ9NY25 188 aa16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 FUT9Q9Y231 359 aa16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 TIMM9Q9Y5J7 89 aa16.55■□□□□ 0.24
SFSWAP-204ENST00000535399 XCL2Q9UBD3 114 aa16.54■□□□□ 0.24
SFSWAP-204ENST00000535399 TRBV19A0A075B6N1 114 aa16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF253O75346 499 aa16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF705DP0CH99 300 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF705BP0CI00 300 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 CNN1P51911 297 aaKnown RBP16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 PSG9Q00887 426 aa16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 AMTNQ6UX39 209 aa16.53■□□□□ 0.24
SFSWAP-204ENST00000535399 A0A0J9YWU9 116 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 DUSP14O95147 198 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 NDUFB4O95168 129 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 FXYD7P58549 80 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 HSD17B11Q8NBQ5 300 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 OR8A1Q8NGG7 326 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 RPUSD4Q96CM3 377 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 C1QTNF4Q9BXJ3 329 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 SLC35B3Q9H1N7 401 aa16.52■□□□□ 0.24
SFSWAP-204ENST00000535399 ZNF705FA8MVS1 300 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 C3orf84H3BNL1 204 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 ARPC5O15511 151 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 PRB4P10163 310 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 M6PRP20645 277 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 ATP6V0CP27449 155 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 ACOT6Q3I5F7 207 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 RPL7L1Q6DKI1 246 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 Q6ZNX1 250 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 MFFQ9GZY8 342 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 OR51M1Q9H341 326 aa16.51■□□□□ 0.23
SFSWAP-204ENST00000535399 ZNF705EA8MWA4 302 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 RHOBP62745 196 aa16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 OR2G3Q8NGZ4 309 aa16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 FXYD5Q96DB9 178 aa16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 ZNF503Q96F45 646 aa16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 PSMG3Q9BT73 122 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 PAXXQ9BUH6 204 aa16.5■□□□□ 0.23
SFSWAP-204ENST00000535399 PRAC2D3DTV9 90 aa16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 RAB2AP61019 212 aa16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 HIST1H1AQ02539 215 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 PDE6HQ13956 83 aa16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 OR11H4Q8NGC9 324 aa16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 BLNKQ8WV28 456 aa16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 X6R8D5 127 aa16.49■□□□□ 0.23
SFSWAP-204ENST00000535399 EIF3GO75821 320 aaKnown RBP eCLIP16.48■□□□□ 0.23
SFSWAP-204ENST00000535399 NBEAP1P0C6P0 100 aa16.48■□□□□ 0.23
SFSWAP-204ENST00000535399 RNF141Q8WVD5 230 aa16.48■□□□□ 0.23
SFSWAP-204ENST00000535399 SH3BGRL3Q9H299 93 aa16.48■□□□□ 0.23
SFSWAP-204ENST00000535399 BORCS7-ASMTA0A0B4J1R7 106 aa16.47■□□□□ 0.23
SFSWAP-204ENST00000535399 OR7C2O60412 319 aa16.47■□□□□ 0.23
SFSWAP-204ENST00000535399 OR10J4P0C629 311 aa16.47■□□□□ 0.23
SFSWAP-204ENST00000535399 Q8NAQ8 132 aa16.47■□□□□ 0.23
SFSWAP-204ENST00000535399 MRPL53Q96EL3 112 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-204ENST00000535399 TAAR5O14804 337 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 TAS2R45P59539 299 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 KHDC3LQ587J8 217 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 FAM122CQ6P4D5 195 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 OR10G4Q8NGN3 311 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 OR10G9Q8NGN4 311 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 OR10G7Q8NGN6 311 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 C11orf68Q9H3H3 251 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 CYTL1Q9NRR1 136 aa16.46■□□□□ 0.23
SFSWAP-204ENST00000535399 HMSDA8MTL9 139 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms