RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 FAM57AQ8TBR7 257 aa4.33□□□□□ -1.72
CD44-231ENST00000531110 ZNF442Q9H7R0 627 aa4.33□□□□□ -1.72
CD44-231ENST00000531110 FAM60AQ9NP50 221 aa4.33□□□□□ -1.72
CD44-231ENST00000531110 ZNF331Q9NQX6 463 aaPredicted RBP4.33□□□□□ -1.72
CD44-231ENST00000531110 DOCK9Q9BZ29 2069 aa4.33□□□□□ -1.72
CD44-231ENST00000531110 TRBV19A0A075B6N1 114 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 TRGV5A0A0B4J1U4 118 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 TRAV2A0A0B4J234 112 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 TRAV26-2A0A0B4J265 109 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 C5orf63A6NC05 138 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 OOSP1A8MZH6 123 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 LOC730098B7Z3J9 87 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 F2Z2F3 143 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 BCE1O60756 84 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 NPYP01303 97 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 IGKCP01834 107 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 LGALS2P05162 132 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 DSCR4P56555 118 aaPredicted RBP4.32□□□□□ -1.72
CD44-231ENST00000531110 CCL8P80075 99 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 C12orf74Q32Q52 190 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 ZNF876PQ49A33 203 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 FAM219BQ5XKK7 198 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 ZNF841Q6ZN19 808 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 DGAT2L6Q6ZPD8 337 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 C6orf201Q7Z4U5 140 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 UBE2E3Q969T4 207 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 ARRDC1-AS1Q9H2J1 176 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 V9GYV3 84 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 GREB1Q4ZG55 1949 aa4.32□□□□□ -1.72
CD44-231ENST00000531110 PLXNA2O75051 1894 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 PLXNB2O15031 1838 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 NUP98P52948 1817 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 TRAV17A0A0B4J275 112 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 TMEM14DPA8MWL7 114 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 C11orf94C9JXX5 98 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 M0R1B8 84 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 CXCL13O43927 109 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 PGLYRP1O75594 196 aaPredicted RBP4.31□□□□□ -1.72
CD44-231ENST00000531110 C1orf105O95561 183 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 COX6A1P12074 109 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 COX5AP20674 150 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 RTL8BQ17RB0 113 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 MRGPRG-AS1Q2M3A8 158 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 MARCH3Q86UD3 253 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 WDR31Q8NA23 367 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 IFI27L1Q96BM0 104 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 C2orf48Q96LS8 159 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 ODF3Q96PU9 254 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 GPX7Q96SL4 187 aaPredicted RBP4.31□□□□□ -1.72
CD44-231ENST00000531110 STARD5Q9NSY2 213 aa4.31□□□□□ -1.72
CD44-231ENST00000531110 COL16A1Q07092 1604 aaPredicted RBP4.31□□□□□ -1.72
CD44-231ENST00000531110 TRAV8-4A0A0B4J246 113 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 A0A1B0GTH9 108 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 RBAKDNA6NC62 111 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 NGFP01138 241 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 IL4P05112 153 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 ASAH2BP0C7U1 165 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 PATE4P0C8F1 98 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 IL9P15248 144 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 DYNLT3P51808 116 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 NPC2P61916 151 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 OR1C1Q15619 314 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 FKBP1CQ5VVH2 108 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 PLPP4Q5VZY2 271 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 PIANPQ8IYJ0 282 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 VKORC1L1Q8N0U8 176 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 OR52N5Q8NH56 324 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 SSMEM1Q8WWF3 244 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 C4orf45Q96LM5 186 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 NMNAT3Q96T66 252 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 TRGV9Q99603 122 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 FAM173AQ9BQD7 235 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 PRSS27Q9BQR3 290 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 CHAC1Q9BUX1 264 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 CXCL16Q9H2A7 254 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 PDFQ9HBH1 243 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 RETNQ9HD89 108 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 KIAA2026Q5HYC2 2103 aa4.3□□□□□ -1.72
CD44-231ENST00000531110 IGHV3OR15-7A0A075B7D8 119 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 TMEM150CB9EJG8 249 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 LGALS9O00182 355 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 HMGN4O00479 90 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 UPK2O00526 184 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 SLC25A14O95258 325 aaPredicted RBP4.29□□□□□ -1.72
CD44-231ENST00000531110 IGF1P05019 195 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 CD7P09564 240 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 IFI6P09912 130 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 GCHFRP30047 84 aa4.29□□□□□ -1.72
CD44-231ENST00000531110 GNB1P62873 340 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 630.4 ms