RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 IL22RA2Q969J5 263 aa3.14□□□□□ -1.91
CTNND1-226ENST00000530720 IGF2BP2-AS1Q96M15 143 aa3.14□□□□□ -1.91
CTNND1-226ENST00000530720 LINC00052Q96N35 136 aa3.14□□□□□ -1.91
CTNND1-226ENST00000530720 PBDC1Q9BVG4 233 aa3.14□□□□□ -1.91
CTNND1-226ENST00000530720 RBKSQ9H477 322 aa3.14□□□□□ -1.91
CTNND1-226ENST00000530720 LINC00588Q9Y4M8 146 aa3.14□□□□□ -1.91
CTNND1-226ENST00000530720 A0A0B4J2A0 478 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 TEX48A0A1B0GUV7 120 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 ZNF705GA8MUZ8 300 aaPredicted RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 FAM25AB3EWG3 89 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 FAM25CB3EWG5 89 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 FAM25GB3EWG6 89 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 GABARAPH6UMI1 98 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 M0R2Z0 102 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 TNFAIP8O95379 198 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 HBE1P02100 147 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 MBPP02686 304 aaPredicted RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SULT1A3P0DMM9 295 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SULT1A4P0DMN0 295 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 GATA2P23769 480 aaPredicted RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 TSPOP30536 169 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 GPX4P36969 197 aaPredicted RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 CNN1P51911 297 aaKnown RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 LYZP61626 148 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SNRPEP62304 92 aaKnown RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SSBP1Q04837 148 aaKnown RBP3.13□□□□□ -1.91
CTNND1-226ENST00000530720 OR2F1Q13607 317 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SMCO1Q147U7 214 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SPINK13Q1W4C9 94 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 RRN3P1Q2M238 152 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SOHLH1Q5JUK2 328 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SPATA31B1PQ5VZV4 182 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 GGNBP1Q5YKI7 109 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 BAP18Q8IXM2 172 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 LGI3Q8N145 548 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 C6orf223Q8N319 242 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 THAP8Q8NA92 274 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 C15orf53Q8NAA6 179 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 OR51S1Q8NGJ8 323 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 COQ8AQ8NI60 647 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 TRGV9Q99603 122 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 DOK5Q9P104 306 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 SHPKQ9UHJ6 478 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 GOLT1BQ9Y3E0 138 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 U3KQ87 197 aa3.13□□□□□ -1.91
CTNND1-226ENST00000530720 MYCBP2O75592 4640 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 ANKRD20A5PA0PJZ0 165 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 ZNF98A6NK75 572 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 ZFP92A6NM28 416 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 LYRM9A8MSI8 78 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 SNRPGP15A8MWD9 76 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 F8WDY8 70 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 H0Y8G0 127 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 CTDSPLO15194 276 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 MRPS12O15235 138 aaKnown RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 ATP6V1G1O75348 118 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 NDUFB4O95168 129 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 PRB4P10163 310 aaPredicted RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 NUP62P37198 522 aaPredicted RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 ID1P41134 155 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 CCR6P51684 374 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 ATP5IP56385 69 aaPredicted RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 DAD1P61803 113 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 SPCS2Q15005 226 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 EBLN2Q6P2I7 272 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 PQLC2Q6ZP29 291 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 Q6ZRN7 208 aaPredicted RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 SPATA12Q7Z6I5 190 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 NOXA1Q86UR1 476 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 OR8I2Q8N0Y5 310 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 RNF182Q8N6D2 247 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 RNASE8Q8TDE3 154 aaKnown RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 SOSTQ9BQB4 213 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 C7orf50Q9BRJ6 194 aaKnown RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 RSG1Q9BU20 258 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 SLC25A39Q9BZJ4 359 aaPredicted RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 MAGT1Q9H0U3 335 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 RPRMQ9NS64 109 aa3.12□□□□□ -1.91
CTNND1-226ENST00000530720 C14orf166Q9Y224 244 aaKnown RBP3.12□□□□□ -1.91
CTNND1-226ENST00000530720 PMS2P5A8MQ11 134 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 DISC1C4P0D8 188 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 F5H768 121 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 H3BRN7 92 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 BOLA2-SMG1P6H3BVE0 249 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 VCYO14598 125 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 INSP01308 110 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 AKAIN1P0CW23 69 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 DEFB130BP0DP73 79 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 DEFB130AP0DP74 79 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 IAPPP10997 89 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 CXCL3P19876 107 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 MEOX2P50222 304 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SSTP61278 116 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 DLK1P80370 383 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 MRPS10P82664 201 aaKnown RBP3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SAMD13Q5VXD3 122 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 SSX7Q7RTT5 188 aa3.11□□□□□ -1.91
CTNND1-226ENST00000530720 CLVS1Q8IUQ0 354 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms