RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 CXCL2P19875 107 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 RPL29P47914 159 aaKnown RBP12.68□□□□□ -0.38
NR1H3-228ENST00000525441 PRR20EP86478 221 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 PRR20CP86479 221 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 PRR20DP86480 221 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 PRR20BP86481 221 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 PRR20AP86496 221 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 ZNF709Q8N972 641 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 TMEM37Q8WXS4 190 aa12.68□□□□□ -0.38
NR1H3-228ENST00000525441 SACSQ9NZJ4 4579 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 MPC2O95563 127 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 PET100P0DJ07 73 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 FGF7P21781 194 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 B2MP61769 119 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 OPCMLQ14982 345 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 LCN15Q6UWW0 184 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 ZNF705AQ6ZN79 300 aaPredicted RBP12.67□□□□□ -0.38
NR1H3-228ENST00000525441 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 ST6GAL2Q96JF0 529 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 NEU1Q99519 415 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 SLC35B3Q9H1N7 401 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 SLC39A9Q9NUM3 307 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
NR1H3-228ENST00000525441 RYR2Q92736 4967 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 A8MTW9 85 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 H0YIZ8 118 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 MRPS12O15235 138 aaKnown RBP12.66□□□□□ -0.38
NR1H3-228ENST00000525441 AMBPP02760 352 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 SLC50A1Q9BRV3 221 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 RNF126Q9BV68 326 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 OR5AC2Q9NZP5 309 aa12.66□□□□□ -0.38
NR1H3-228ENST00000525441 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 ZNF705FA8MVS1 300 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-228ENST00000525441 C11orf94C9JXX5 98 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 ZNF705DP0CH99 300 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-228ENST00000525441 ZNF705BP0CI00 300 aaPredicted RBP12.65□□□□□ -0.38
NR1H3-228ENST00000525441 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
NR1H3-228ENST00000525441 NHLH2Q02577 135 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 PSG3Q16557 428 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 OR2T35Q8NGX2 323 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
NR1H3-228ENST00000525441 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 G3V3Q6 166 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 Q5BKY6 102 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 TCTE3Q8IZS6 198 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 RFNGQ9Y644 331 aa12.64□□□□□ -0.39
NR1H3-228ENST00000525441 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
NR1H3-228ENST00000525441 CLINT1Q14677 625 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 GUK1Q16774 197 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 MORN5Q5VZ52 161 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 OR8A1Q8NGG7 326 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 RPUSD4Q96CM3 377 aaKnown RBP12.63□□□□□ -0.39
NR1H3-228ENST00000525441 IGF2BP2-AS1Q96M15 143 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
NR1H3-228ENST00000525441 KCNIP2Q9NS61 270 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 PPP1R14DQ9NXH3 145 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 MBD2Q9UBB5 411 aa12.63□□□□□ -0.39
NR1H3-228ENST00000525441 HBE1P02100 147 aa12.62□□□□□ -0.39
NR1H3-228ENST00000525441 RHOBP62745 196 aa12.62□□□□□ -0.39
NR1H3-228ENST00000525441 TMEM208Q9BTX3 173 aa12.62□□□□□ -0.39
NR1H3-228ENST00000525441 TRAV10A0A0B4J240 114 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 BOLA2-SMG1P6H3BVE0 249 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 LY6G6CO95867 125 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 INSP01308 110 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 IGLC2P0DOY2 106 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 TCTAP57738 103 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 SPINK13Q1W4C9 94 aa12.61□□□□□ -0.39
NR1H3-228ENST00000525441 ALMS1Q8TCU4 4167 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 LYSTQ99698 3801 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 TEX48A0A1B0GUV7 120 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 M0R2Z0 102 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 SNRPCP09234 159 aaKnown RBP12.6□□□□□ -0.39
NR1H3-228ENST00000525441 RRN3P1Q2M238 152 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 Q6ZTC4 211 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 CELA1Q9UNI1 258 aa12.6□□□□□ -0.39
NR1H3-228ENST00000525441 C17orf112F2Z3M2 114 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 H3BQ15 152 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 H3BTX0 84 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 ZNF253O75346 499 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 SPART-AS1P0CW21 52 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 EMP1P54849 157 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 ATP5SQ99766 215 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 WDR61Q9GZS3 305 aaKnown RBP12.59□□□□□ -0.39
NR1H3-228ENST00000525441 TMEM14CQ9P0S9 112 aa12.59□□□□□ -0.39
NR1H3-228ENST00000525441 HSPB11Q9Y547 144 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms