RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZNF709Q8N972 641 aa14.98□□□□□ -0.01
TRIM35-203ENST00000521253 Q8NAQ8 132 aa14.98□□□□□ -0.01
TRIM35-203ENST00000521253 MBD2Q9UBB5 411 aa14.98□□□□□ -0.01
TRIM35-203ENST00000521253 TRAV5A0A0B4J249 113 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 CXorf65A6NEN9 183 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 HLA-DMBP28068 263 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 PSG9Q00887 426 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 ZNF738Q8NE65 137 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 LRRC20Q8TCA0 184 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 SLC35B3Q9H1N7 401 aa14.97□□□□□ -0.01
TRIM35-203ENST00000521253 IGHV4-28A0A0C4DH34 117 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 MIFP14174 115 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 CXCL2P19875 107 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 FCN2Q15485 313 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 LCN15Q6UWW0 184 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 WDR61Q9GZS3 305 aaKnown RBP14.96□□□□□ -0.01
TRIM35-203ENST00000521253 MED28Q9H204 178 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 HSPB11Q9Y547 144 aa14.96□□□□□ -0.01
TRIM35-203ENST00000521253 A8MTW9 85 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 H3BTX0 84 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 ZNF705DP0CH99 300 aaPredicted RBP14.95□□□□□ -0.02
TRIM35-203ENST00000521253 ZNF705BP0CI00 300 aaPredicted RBP14.95□□□□□ -0.02
TRIM35-203ENST00000521253 RBMY1A1P0DJD3 496 aaKnown RBP14.95□□□□□ -0.02
TRIM35-203ENST00000521253 RBMY1CP0DJD4 496 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 IGLC2P0DOY2 106 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 RPL12P30050 165 aaKnown RBP14.95□□□□□ -0.02
TRIM35-203ENST00000521253 CNN1P51911 297 aaKnown RBP14.95□□□□□ -0.02
TRIM35-203ENST00000521253 RBMY1FQ15415 496 aaKnown RBP14.95□□□□□ -0.02
TRIM35-203ENST00000521253 GCSAMLQ5JQS6 135 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 OR11H7Q8NGC8 314 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 ATP5SQ99766 215 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 RYR2Q92736 4967 aa14.95□□□□□ -0.02
TRIM35-203ENST00000521253 H3BQ15 152 aa14.94□□□□□ -0.02
TRIM35-203ENST00000521253 PSG3Q16557 428 aa14.94□□□□□ -0.02
TRIM35-203ENST00000521253 HRH4Q9H3N8 390 aa14.94□□□□□ -0.02
TRIM35-203ENST00000521253 ZNF331Q9NQX6 463 aaPredicted RBP14.94□□□□□ -0.02
TRIM35-203ENST00000521253 SLC17A3O00476 420 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 DUSP14O95147 198 aaKnown RBP14.93□□□□□ -0.02
TRIM35-203ENST00000521253 NANOS2P60321 138 aaKnown RBP14.93□□□□□ -0.02
TRIM35-203ENST00000521253 RGS21Q2M5E4 152 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 AMTNQ6UX39 209 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 ZNF705AQ6ZN79 300 aaPredicted RBP14.93□□□□□ -0.02
TRIM35-203ENST00000521253 C11orf45Q8TAV5 145 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 SLC50A1Q9BRV3 221 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 SMIM3Q9BZL3 60 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 MFFQ9GZY8 342 aa14.93□□□□□ -0.02
TRIM35-203ENST00000521253 LCE6AA0A183 80 aa14.92□□□□□ -0.02
TRIM35-203ENST00000521253 PRB4P10163 310 aaPredicted RBP14.92□□□□□ -0.02
TRIM35-203ENST00000521253 NUPR2A6NF83 97 aa14.91□□□□□ -0.02
TRIM35-203ENST00000521253 OR8A1Q8NGG7 326 aa14.91□□□□□ -0.02
TRIM35-203ENST00000521253 RPUSD4Q96CM3 377 aaKnown RBP14.91□□□□□ -0.02
TRIM35-203ENST00000521253 SAT2Q96F10 170 aaPredicted RBP14.91□□□□□ -0.02
TRIM35-203ENST00000521253 KCNIP2Q9NS61 270 aa14.91□□□□□ -0.02
TRIM35-203ENST00000521253 DNAH1Q9P2D7 4330 aa14.9□□□□□ -0.02
TRIM35-203ENST00000521253 IGHV3OR16-12A0A075B7B8 117 aa14.9□□□□□ -0.02
TRIM35-203ENST00000521253 ZNF705FA8MVS1 300 aaPredicted RBP14.9□□□□□ -0.02
TRIM35-203ENST00000521253 HIST1H1AQ02539 215 aaPredicted RBP14.9□□□□□ -0.02
TRIM35-203ENST00000521253 GUK1Q16774 197 aa14.9□□□□□ -0.02
TRIM35-203ENST00000521253 CEMP1Q6PRD7 247 aaPredicted RBP14.9□□□□□ -0.02
TRIM35-203ENST00000521253 PHLDA1Q8WV24 401 aaPredicted RBP14.9□□□□□ -0.02
TRIM35-203ENST00000521253 ZNF586Q9NXT0 402 aa14.9□□□□□ -0.02
TRIM35-203ENST00000521253 TMEM14CQ9P0S9 112 aa14.9□□□□□ -0.02
TRIM35-203ENST00000521253 C17orf112F2Z3M2 114 aa14.89□□□□□ -0.03
TRIM35-203ENST00000521253 IFNA5P01569 189 aa14.89□□□□□ -0.03
TRIM35-203ENST00000521253 OXA1LQ15070 435 aa14.89□□□□□ -0.03
TRIM35-203ENST00000521253 NEU1Q99519 415 aa14.89□□□□□ -0.03
TRIM35-203ENST00000521253 WFDC1Q9HC57 220 aa14.89□□□□□ -0.03
TRIM35-203ENST00000521253 M0R2Z0 102 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 PYYP10082 97 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 SPINK13Q1W4C9 94 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 MIR17HGQ75NE6 70 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 C1orf158Q8N1D5 194 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 SCGB1C1Q8TD33 95 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 GOLT1BQ9Y3E0 138 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 ALMS1Q8TCU4 4167 aa14.88□□□□□ -0.03
TRIM35-203ENST00000521253 TRBV19A0A075B6N1 114 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 PRAC2D3DTV9 90 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 GIPP09681 153 aaPredicted RBP14.87□□□□□ -0.03
TRIM35-203ENST00000521253 RHOBP62745 196 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 Q5BKY6 102 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 FAM167A-AS1Q96KT0 104 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 IGF2BP2-AS1Q96M15 143 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 SLC25A2Q9BXI2 301 aa14.87□□□□□ -0.03
TRIM35-203ENST00000521253 SMIM9A6NGZ8 99 aa14.86□□□□□ -0.03
TRIM35-203ENST00000521253 BOLA2-SMG1P6H3BVE0 249 aa14.86□□□□□ -0.03
TRIM35-203ENST00000521253 CRXO43186 299 aaPredicted RBP14.86□□□□□ -0.03
TRIM35-203ENST00000521253 ZNF253O75346 499 aa14.86□□□□□ -0.03
TRIM35-203ENST00000521253 AMBPP02760 352 aa14.86□□□□□ -0.03
TRIM35-203ENST00000521253 HIST1H1EP10412 219 aaKnown RBP14.86□□□□□ -0.03
TRIM35-203ENST00000521253 ASB13Q8WXK3 278 aa14.86□□□□□ -0.03
TRIM35-203ENST00000521253 PARD6GQ9BYG4 376 aaPredicted RBP14.86□□□□□ -0.03
TRIM35-203ENST00000521253 JTBO76095 146 aa14.85□□□□□ -0.03
TRIM35-203ENST00000521253 NDUFB4O95168 129 aa14.85□□□□□ -0.03
TRIM35-203ENST00000521253 FFAR4Q5NUL3 377 aa14.85□□□□□ -0.03
TRIM35-203ENST00000521253 MRPL32Q9BYC8 188 aaKnown RBP14.85□□□□□ -0.03
TRIM35-203ENST00000521253 CELA1Q9UNI1 258 aa14.85□□□□□ -0.03
TRIM35-203ENST00000521253 FUT9Q9Y231 359 aa14.85□□□□□ -0.03
TRIM35-203ENST00000521253 KLK5Q9Y337 293 aaPredicted RBP14.85□□□□□ -0.03
TRIM35-203ENST00000521253 TRAV12-2A0A075B6T6 113 aa14.84□□□□□ -0.03
TRIM35-203ENST00000521253 INSP01308 110 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms