RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 SIGLEC15Q6ZMC9 328 aa19.7■□□□□ 0.74
SNTB1-202ENST00000517992 ZNF491Q8N8L2 437 aa19.7■□□□□ 0.74
SNTB1-202ENST00000517992 RNF125Q96EQ8 232 aa19.7■□□□□ 0.74
SNTB1-202ENST00000517992 NDFIP1Q9BT67 221 aa19.7■□□□□ 0.74
SNTB1-202ENST00000517992 C1RLQ9NZP8 487 aa19.7■□□□□ 0.74
SNTB1-202ENST00000517992 TRAV30A0A087WSZ9 112 aa19.69■□□□□ 0.74
SNTB1-202ENST00000517992 ODF3BA8MYP8 253 aa19.69■□□□□ 0.74
SNTB1-202ENST00000517992 K7EQM0 130 aa19.69■□□□□ 0.74
SNTB1-202ENST00000517992 HLA-DRB1P01911 266 aa19.69■□□□□ 0.74
SNTB1-202ENST00000517992 APOHP02749 345 aaPredicted RBP19.69■□□□□ 0.74
SNTB1-202ENST00000517992 LOC102724200A0A096LPH7 203 aaPredicted RBP19.69■□□□□ 0.74
SNTB1-202ENST00000517992 WI2-2373I1.2A0A1W2PRP0 233 aa19.69■□□□□ 0.74
SNTB1-202ENST00000517992 TRAV9-2A0A087WT02 112 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 MRPS12O15235 138 aaKnown RBP19.68■□□□□ 0.74
SNTB1-202ENST00000517992 GRNP28799 593 aaKnown RBP19.68■□□□□ 0.74
SNTB1-202ENST00000517992 COL5A1-AS1Q5SY13 56 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 CHEK1O14757 476 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 FAM120AOSQ5T036 256 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 LCN12Q6JVE5 192 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 TXN2Q99757 166 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 LPAR2Q9HBW0 351 aa19.68■□□□□ 0.74
SNTB1-202ENST00000517992 NPIPB5A8MRT5 1133 aa19.67■□□□□ 0.74
SNTB1-202ENST00000517992 GATD1Q8NB37 220 aa19.67■□□□□ 0.74
SNTB1-202ENST00000517992 NPSP0C0P6 89 aa19.67■□□□□ 0.74
SNTB1-202ENST00000517992 HNRNPA3P51991 378 aaKnown RBP19.67■□□□□ 0.74
SNTB1-202ENST00000517992 OVOL3O00110 214 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 CRXO43186 299 aaPredicted RBP19.66■□□□□ 0.74
SNTB1-202ENST00000517992 PRTN3P24158 256 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 ARF6P62330 175 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 PDE6HQ13956 83 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 C5orf64Q2M2E5 130 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 Q6ZN92 141 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 TMEM70Q9BUB7 260 aa19.66■□□□□ 0.74
SNTB1-202ENST00000517992 ZNF785A8K8V0 405 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 IL4P05112 153 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 SMIM15Q7Z3B0 74 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 ZC2HC1AQ96GY0 325 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 HILPDAQ9Y5L2 63 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 A0A1B0GW15 77 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 PSG3Q16557 428 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 ZNF414Q96IQ9 312 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 PSG8Q9UQ74 426 aa19.65■□□□□ 0.74
SNTB1-202ENST00000517992 IGLV11-55A0A075B6I3 123 aa19.64■□□□□ 0.74
SNTB1-202ENST00000517992 Q56UQ5 140 aa19.64■□□□□ 0.74
SNTB1-202ENST00000517992 LOC105371242A0A075B767 164 aa19.64■□□□□ 0.73
SNTB1-202ENST00000517992 Q6AWC8 147 aa19.64■□□□□ 0.73
SNTB1-202ENST00000517992 MRPS16Q9Y3D3 137 aaKnown RBP19.64■□□□□ 0.73
SNTB1-202ENST00000517992 FLNCQ14315 2725 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.63■□□□□ 0.73
SNTB1-202ENST00000517992 A0A1B0GUT8 65 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 BATFQ16520 125 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 NEU4Q8WWR8 484 aaPredicted RBP19.63■□□□□ 0.73
SNTB1-202ENST00000517992 C17orf77Q96MU5 243 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 IGHV1-24A0A0C4DH33 117 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 SH2D7A6NKC9 451 aaPredicted RBP19.63■□□□□ 0.73
SNTB1-202ENST00000517992 TOX4O94842 621 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 OR5AL1P0C617 328 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 MFAP4P55083 255 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 ATOH7Q8N100 152 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 LAMTOR2Q9Y2Q5 125 aa19.63■□□□□ 0.73
SNTB1-202ENST00000517992 SERTM2A0A1B0GWG4 89 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 OOSP1A8MZH6 123 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 GNG7O60262 68 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 RIGQ13278 110 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 C11orf71Q6IPW1 123 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 CCDC144NLQ6NUI1 221 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 ZNF562Q6V9R5 426 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 FANCD2OSQ96PS1 177 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 IGFBPL1Q8WX77 278 aa19.62■□□□□ 0.73
SNTB1-202ENST00000517992 KLRD1Q13241 179 aa19.61■□□□□ 0.73
SNTB1-202ENST00000517992 TTC9CQ8N5M4 171 aa19.61■□□□□ 0.73
SNTB1-202ENST00000517992 CLEC5AQ9NY25 188 aa19.61■□□□□ 0.73
SNTB1-202ENST00000517992 TSPOP30536 169 aa19.6■□□□□ 0.73
SNTB1-202ENST00000517992 FCGR2BP31994 310 aaPredicted RBP19.6■□□□□ 0.73
SNTB1-202ENST00000517992 Q71RC1 249 aaPredicted RBP19.6■□□□□ 0.73
SNTB1-202ENST00000517992 KIR3DL3Q8N743 410 aa19.6■□□□□ 0.73
SNTB1-202ENST00000517992 ARPC1AQ92747 370 aa19.6■□□□□ 0.73
SNTB1-202ENST00000517992 SPTBN1Q01082 2364 aaKnown RBP19.6■□□□□ 0.73
SNTB1-202ENST00000517992 MYO18BQ8IUG5 2567 aa19.6■□□□□ 0.73
SNTB1-202ENST00000517992 LY6HO94772 140 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 HES1Q14469 280 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 TMEM238C9JI98 176 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 LEPROTL1O95214 131 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 CD24P25063 80 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 SPATA12Q7Z6I5 190 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 Q8N6K4 173 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 AAMDCQ9H7C9 122 aa19.59■□□□□ 0.73
SNTB1-202ENST00000517992 ANKHD1Q8IWZ3 2542 aaKnown RBP19.59■□□□□ 0.73
SNTB1-202ENST00000517992 SYS1-DBNDD2H3BUS1 97 aa19.58■□□□□ 0.73
SNTB1-202ENST00000517992 M0QZ24 198 aa19.58■□□□□ 0.73
SNTB1-202ENST00000517992 KLF17Q5JT82 389 aaPredicted RBP19.58■□□□□ 0.73
SNTB1-202ENST00000517992 PRR31Q5SQ13 230 aa19.58■□□□□ 0.73
SNTB1-202ENST00000517992 COL12A1Q99715 3063 aa19.58■□□□□ 0.72
SNTB1-202ENST00000517992 F8W735 103 aaPredicted RBP19.58■□□□□ 0.72
SNTB1-202ENST00000517992 IGLL1P15814 213 aa19.58■□□□□ 0.72
SNTB1-202ENST00000517992 EBI3Q14213 229 aa19.58■□□□□ 0.72
SNTB1-202ENST00000517992 ITLN2Q8WWU7 325 aaPredicted RBP19.58■□□□□ 0.72
SNTB1-202ENST00000517992 MINOS1Q5TGZ0 78 aa19.57■□□□□ 0.72
SNTB1-202ENST00000517992 THYN1Q9P016 225 aa19.57■□□□□ 0.72
SNTB1-202ENST00000517992 MINOS1-NBL1R4GNA1 71 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms