RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 UCHL1P09936 223 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 GALR1P47211 349 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 MEOX2P50222 304 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 SCAND1P57086 179 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 SLAQ13239 276 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 IBA57Q5T440 356 aaKnown RBP2.04□□□□□ -2.08
CHD1-211ENST00000514344 IDNKQ5T6J7 187 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 FAM219AQ8IW50 185 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 OR1B1Q8NGR6 318 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 ZNF479Q96JC4 524 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 SLC25A32Q9H2D1 315 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 MED4Q9NPJ6 270 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 IFT46Q9NQC8 304 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 PRR13Q9NZ81 148 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 VAX2Q9UIW0 290 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 RRP15Q9Y3B9 282 aaKnown RBP2.04□□□□□ -2.08
CHD1-211ENST00000514344 A0A087WYN8 130 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 CRYM-AS1A6NIL9 109 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 CEBPZOSA8MTT3 80 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 ATG12O94817 140 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 IGKV1-39P01597 117 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 IGKV1D-39P04432 117 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 CHTF8P0CG12 524 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 PSMA1P25786 263 aaKnown RBP2.04□□□□□ -2.08
CHD1-211ENST00000514344 HRH1P35367 487 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 NUP62P37198 522 aaPredicted RBP2.04□□□□□ -2.08
CHD1-211ENST00000514344 SAMD13Q5VXD3 122 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 TBC1D26Q86UD7 250 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 NANOGP1Q8N7R0 232 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 C11orf72Q8NBR9 251 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 C9orf16Q9BUW7 83 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 IGHV3-16A0A0C4DH30 117 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 CASQ2O14958 399 aaPredicted RBP2.04□□□□□ -2.08
CHD1-211ENST00000514344 RAB3BP20337 219 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 MYL9P24844 172 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 PSMB9P28065 219 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 HTR2BP41595 481 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 RPL5P46777 297 aaKnown RBP2.04□□□□□ -2.08
CHD1-211ENST00000514344 C1orf194Q5T5A4 169 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 FAM122CQ6P4D5 195 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 SVIPQ8NHG7 77 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 C7orf33Q8WU49 177 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 ZC2HC1AQ96GY0 325 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 MND1Q9BWT6 205 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 PSORS1C1Q9UIG5 152 aa2.04□□□□□ -2.08
CHD1-211ENST00000514344 TRAV26-2A0A0B4J265 109 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 A0A0G2JRQ6 117 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 LINC00854A0A1B0GVQ3 168 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 SNRPGP15A8MWD9 76 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 SPINK4O60575 86 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 ORM1P02763 201 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 CLEC2LP0C7M8 214 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 SLC25A4P12235 298 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 LINC01547P58512 204 aaPredicted RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 PRR3P79522 188 aaKnown RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 MEF2DQ14814 521 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 MSMO1Q15800 293 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 OR8G2PQ6IF36 304 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 C8orf59Q8N0T1 100 aaPredicted RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 DHRSXQ8N5I4 330 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 OR5H6Q8NGV6 325 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 RPUSD4Q96CM3 377 aaKnown RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 RRNAD1Q96FB5 475 aaKnown RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 VGLL1Q99990 258 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 PYGO2Q9BRQ0 406 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 RHBDL2Q9NX52 303 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 TP53TG3Q9ULZ0 132 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 USH2AO75445 5202 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 LOC100506127A0A0U1RQW1 187 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 FAM231BA6NCW3 169 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 CXCL3P19876 107 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 KLF9Q13886 244 aaPredicted RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 LAIR2Q6ISS4 152 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 Q6ZQT7 251 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 SNX29P2Q8IUI4 249 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 ZBTB8BQ8NAP8 495 aaPredicted RBP2.03□□□□□ -2.08
CHD1-211ENST00000514344 LYPD6BQ8NI32 183 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 MGLLQ99685 303 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 C20orf144Q9BQM9 153 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 COX11Q9Y6N1 276 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 TMEM56-RWDD3S4R434 201 aa2.03□□□□□ -2.08
CHD1-211ENST00000514344 IGHV3-73A0A0B4J1V6 119 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 TEX13DA0A0J9YY54 714 aaPredicted RBP2.02□□□□□ -2.09
CHD1-211ENST00000514344 IRGMA1A4Y4 181 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 SMCO3A2RU48 225 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 GGTLC3B5MD39 225 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 H3BP45 60 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 TAAR5O14804 337 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 SCGB1D2O95969 90 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 OR5G3P0C626 314 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 ANXA7P20073 488 aaKnown RBP2.02□□□□□ -2.09
CHD1-211ENST00000514344 TCL1AP56279 114 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 ZNF680Q8NEM1 530 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 SLC24A4Q8NFF2 622 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 OR5AP2Q8NGF4 316 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 OR5H2Q8NGV7 314 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 ZNF431Q8TF32 576 aaPredicted RBP2.02□□□□□ -2.09
CHD1-211ENST00000514344 UBE2WQ96B02 151 aa2.02□□□□□ -2.09
CHD1-211ENST00000514344 TP53RKQ96S44 253 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms